Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup43P59235 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nup43P59235 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup43P59235 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.66□□□□□ -0.06
Nup43P59235 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Nup43P59235 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nup43P59235 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.65□□□□□ -0.06
Nup43P59235 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nup43P59235 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Nup43P59235 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nup43P59235 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nup43P59235 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nup43P59235 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nup43P59235 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nup43P59235 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Nup43P59235 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nup43P59235 Gm15173-201ENSMUST00000122049 433 ntBASIC14.65□□□□□ -0.06
Nup43P59235 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.65□□□□□ -0.06
Nup43P59235 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Nup43P59235 Gm7230-201ENSMUST00000173026 815 ntBASIC14.65□□□□□ -0.06
Nup43P59235 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Nup43P59235 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nup43P59235 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Nup43P59235 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Nup43P59235 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nup43P59235 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nup43P59235 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Nup43P59235 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.65□□□□□ -0.06
Nup43P59235 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nup43P59235 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nup43P59235 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nup43P59235 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Nup43P59235 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nup43P59235 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nup43P59235 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nup43P59235 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nup43P59235 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nup43P59235 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nup43P59235 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nup43P59235 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nup43P59235 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nup43P59235 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nup43P59235 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nup43P59235 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nup43P59235 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.64□□□□□ -0.07
Nup43P59235 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Nup43P59235 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Nup43P59235 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nup43P59235 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nup43P59235 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.64□□□□□ -0.07
Nup43P59235 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Nup43P59235 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.64□□□□□ -0.07
Nup43P59235 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.64□□□□□ -0.07
Nup43P59235 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Nup43P59235 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nup43P59235 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nup43P59235 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nup43P59235 Gm18195-201ENSMUST00000207604 706 ntBASIC14.64□□□□□ -0.07
Nup43P59235 Gm10060-201ENSMUST00000212002 111 ntBASIC14.64□□□□□ -0.07
Nup43P59235 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.64□□□□□ -0.07
Nup43P59235 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nup43P59235 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nup43P59235 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nup43P59235 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nup43P59235 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nup43P59235 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nup43P59235 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nup43P59235 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nup43P59235 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nup43P59235 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nup43P59235 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nup43P59235 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nup43P59235 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nup43P59235 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nup43P59235 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nup43P59235 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nup43P59235 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nup43P59235 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Nup43P59235 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nup43P59235 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nup43P59235 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nup43P59235 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Nup43P59235 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Nup43P59235 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nup43P59235 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Nup43P59235 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Nup43P59235 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.63□□□□□ -0.07
Nup43P59235 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nup43P59235 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.63□□□□□ -0.07
Nup43P59235 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.63□□□□□ -0.07
Nup43P59235 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.63□□□□□ -0.07
Nup43P59235 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.63□□□□□ -0.07
Nup43P59235 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.63□□□□□ -0.07
Nup43P59235 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.63□□□□□ -0.07
Nup43P59235 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.63□□□□□ -0.07
Nup43P59235 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nup43P59235 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nup43P59235 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nup43P59235 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Nup43P59235 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms