Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SmoP56726 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
SmoP56726 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SmoP56726 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
SmoP56726 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SmoP56726 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.58■□□□□ 0.08
SmoP56726 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
SmoP56726 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SmoP56726 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SmoP56726 Gm15467-201ENSMUST00000120582 445 ntBASIC15.58■□□□□ 0.08
SmoP56726 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.58■□□□□ 0.08
SmoP56726 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SmoP56726 Gm8000-201ENSMUST00000188378 592 ntBASIC15.58■□□□□ 0.08
SmoP56726 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.58■□□□□ 0.08
SmoP56726 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.58■□□□□ 0.08
SmoP56726 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SmoP56726 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SmoP56726 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SmoP56726 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SmoP56726 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SmoP56726 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SmoP56726 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
SmoP56726 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.58■□□□□ 0.08
SmoP56726 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SmoP56726 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SmoP56726 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
SmoP56726 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SmoP56726 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.57■□□□□ 0.08
SmoP56726 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SmoP56726 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
SmoP56726 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
SmoP56726 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SmoP56726 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SmoP56726 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SmoP56726 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SmoP56726 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.57■□□□□ 0.08
SmoP56726 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SmoP56726 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SmoP56726 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SmoP56726 Gm5264-201ENSMUST00000190584 848 ntBASIC15.57■□□□□ 0.08
SmoP56726 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
SmoP56726 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SmoP56726 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
SmoP56726 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.57■□□□□ 0.08
SmoP56726 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SmoP56726 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.57■□□□□ 0.08
SmoP56726 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.57■□□□□ 0.08
SmoP56726 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SmoP56726 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SmoP56726 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SmoP56726 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SmoP56726 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.57■□□□□ 0.08
SmoP56726 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SmoP56726 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SmoP56726 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
SmoP56726 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SmoP56726 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SmoP56726 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SmoP56726 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SmoP56726 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SmoP56726 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SmoP56726 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SmoP56726 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SmoP56726 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.56■□□□□ 0.08
SmoP56726 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.56■□□□□ 0.08
SmoP56726 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.56■□□□□ 0.08
SmoP56726 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SmoP56726 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.56■□□□□ 0.08
SmoP56726 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SmoP56726 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SmoP56726 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SmoP56726 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SmoP56726 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SmoP56726 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SmoP56726 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.56■□□□□ 0.08
SmoP56726 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SmoP56726 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SmoP56726 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SmoP56726 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SmoP56726 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.56■□□□□ 0.08
SmoP56726 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
SmoP56726 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SmoP56726 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SmoP56726 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
SmoP56726 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SmoP56726 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SmoP56726 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.55■□□□□ 0.08
SmoP56726 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SmoP56726 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.55■□□□□ 0.08
SmoP56726 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SmoP56726 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
SmoP56726 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SmoP56726 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.55■□□□□ 0.08
SmoP56726 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SmoP56726 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SmoP56726 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SmoP56726 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.55■□□□□ 0.08
SmoP56726 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.55■□□□□ 0.08
SmoP56726 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
SmoP56726 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms