Protein–RNA interactions for Protein: P56477

Irf5, Interferon regulatory factor 5, mousemouse

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf5P56477 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Irf5P56477 Mir8117-201ENSMUST00000184773 107 ntBASIC18.37■□□□□ 0.53
Irf5P56477 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Irf5P56477 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC18.37■□□□□ 0.53
Irf5P56477 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC18.37■□□□□ 0.53
Irf5P56477 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC18.37■□□□□ 0.53
Irf5P56477 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC18.37■□□□□ 0.53
Irf5P56477 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Irf5P56477 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Irf5P56477 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Irf5P56477 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.37■□□□□ 0.53
Irf5P56477 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Irf5P56477 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Irf5P56477 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Irf5P56477 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Irf5P56477 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC18.37■□□□□ 0.53
Irf5P56477 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Irf5P56477 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
Irf5P56477 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Irf5P56477 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Irf5P56477 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.36■□□□□ 0.53
Irf5P56477 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC18.36■□□□□ 0.53
Irf5P56477 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Irf5P56477 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Irf5P56477 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.36■□□□□ 0.53
Irf5P56477 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Irf5P56477 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Irf5P56477 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Irf5P56477 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Irf5P56477 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Irf5P56477 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Irf5P56477 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Irf5P56477 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Irf5P56477 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Irf5P56477 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Irf5P56477 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC18.35■□□□□ 0.53
Irf5P56477 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Irf5P56477 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Irf5P56477 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC18.35■□□□□ 0.53
Irf5P56477 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Irf5P56477 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Irf5P56477 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Irf5P56477 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Irf5P56477 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Irf5P56477 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Irf5P56477 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Irf5P56477 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Irf5P56477 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Irf5P56477 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Irf5P56477 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC18.35■□□□□ 0.53
Irf5P56477 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.35■□□□□ 0.53
Irf5P56477 Mir3113-201ENSMUST00000175478 76 ntBASIC18.35■□□□□ 0.53
Irf5P56477 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC18.35■□□□□ 0.53
Irf5P56477 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Irf5P56477 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC18.35■□□□□ 0.53
Irf5P56477 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC18.35■□□□□ 0.53
Irf5P56477 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Irf5P56477 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.35■□□□□ 0.53
Irf5P56477 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Irf5P56477 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Irf5P56477 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Irf5P56477 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Irf5P56477 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Irf5P56477 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Irf5P56477 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Irf5P56477 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Irf5P56477 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Irf5P56477 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Irf5P56477 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Irf5P56477 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Irf5P56477 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Irf5P56477 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Irf5P56477 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Irf5P56477 Gm5648-201ENSMUST00000122244 1587 ntBASIC18.34■□□□□ 0.53
Irf5P56477 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Irf5P56477 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Irf5P56477 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Irf5P56477 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Irf5P56477 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Irf5P56477 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.34■□□□□ 0.53
Irf5P56477 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Irf5P56477 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC18.34■□□□□ 0.53
Irf5P56477 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Irf5P56477 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Irf5P56477 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Irf5P56477 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Irf5P56477 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Irf5P56477 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Irf5P56477 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Irf5P56477 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Irf5P56477 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Irf5P56477 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Irf5P56477 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Irf5P56477 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Irf5P56477 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Irf5P56477 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Irf5P56477 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Irf5P56477 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Irf5P56477 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Irf5P56477 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms