Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nub1P54729 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Nub1P54729 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nub1P54729 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nub1P54729 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.71■□□□□ 0.27
Nub1P54729 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nub1P54729 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Nub1P54729 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Nub1P54729 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nub1P54729 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nub1P54729 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nub1P54729 Grk6-207ENSMUST00000225925 2769 ntBASIC16.7■□□□□ 0.26
Nub1P54729 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nub1P54729 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nub1P54729 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nub1P54729 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Nub1P54729 Gm13418-201ENSMUST00000119097 944 ntBASIC16.7■□□□□ 0.26
Nub1P54729 Gm11452-201ENSMUST00000122376 690 ntBASIC16.7■□□□□ 0.26
Nub1P54729 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nub1P54729 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.7■□□□□ 0.26
Nub1P54729 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nub1P54729 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.7■□□□□ 0.26
Nub1P54729 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nub1P54729 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Nub1P54729 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Nub1P54729 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
Nub1P54729 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nub1P54729 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nub1P54729 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nub1P54729 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nub1P54729 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nub1P54729 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.7■□□□□ 0.26
Nub1P54729 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nub1P54729 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.7■□□□□ 0.26
Nub1P54729 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nub1P54729 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nub1P54729 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nub1P54729 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nub1P54729 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nub1P54729 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nub1P54729 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nub1P54729 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.69■□□□□ 0.26
Nub1P54729 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nub1P54729 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nub1P54729 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nub1P54729 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nub1P54729 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nub1P54729 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.69■□□□□ 0.26
Nub1P54729 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.69■□□□□ 0.26
Nub1P54729 Gm27741-201ENSMUST00000185060 237 ntBASIC16.69■□□□□ 0.26
Nub1P54729 Gm5864-201ENSMUST00000202263 970 ntBASIC16.69■□□□□ 0.26
Nub1P54729 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Nub1P54729 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.69■□□□□ 0.26
Nub1P54729 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nub1P54729 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nub1P54729 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nub1P54729 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nub1P54729 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nub1P54729 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nub1P54729 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nub1P54729 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nub1P54729 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nub1P54729 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Nub1P54729 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nub1P54729 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nub1P54729 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nub1P54729 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Nub1P54729 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nub1P54729 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nub1P54729 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nub1P54729 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.68■□□□□ 0.26
Nub1P54729 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Nub1P54729 Gm6376-201ENSMUST00000209407 580 ntBASIC16.68■□□□□ 0.26
Nub1P54729 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nub1P54729 Rps4l-201ENSMUST00000071745 943 ntBASIC16.68■□□□□ 0.26
Nub1P54729 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nub1P54729 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nub1P54729 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nub1P54729 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Nub1P54729 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nub1P54729 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nub1P54729 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nub1P54729 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nub1P54729 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nub1P54729 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nub1P54729 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Nub1P54729 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nub1P54729 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nub1P54729 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nub1P54729 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
Nub1P54729 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nub1P54729 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nub1P54729 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Nub1P54729 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Nub1P54729 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nub1P54729 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nub1P54729 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.67■□□□□ 0.26
Nub1P54729 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nub1P54729 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Nub1P54729 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms