Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Pdx1P52946 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.36■□□□□ 0.05
Pdx1P52946 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pdx1P52946 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pdx1P52946 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pdx1P52946 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pdx1P52946 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Pdx1P52946 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pdx1P52946 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Pdx1P52946 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pdx1P52946 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pdx1P52946 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Pdx1P52946 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Pdx1P52946 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pdx1P52946 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Pdx1P52946 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Pdx1P52946 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pdx1P52946 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pdx1P52946 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pdx1P52946 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pdx1P52946 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pdx1P52946 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pdx1P52946 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Pdx1P52946 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
Pdx1P52946 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pdx1P52946 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pdx1P52946 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pdx1P52946 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Pdx1P52946 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pdx1P52946 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Pdx1P52946 Gm15358-201ENSMUST00000119249 520 ntBASIC15.35■□□□□ 0.05
Pdx1P52946 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pdx1P52946 Gm28659-201ENSMUST00000188013 759 ntBASIC15.35■□□□□ 0.05
Pdx1P52946 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pdx1P52946 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pdx1P52946 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pdx1P52946 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pdx1P52946 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Pdx1P52946 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pdx1P52946 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pdx1P52946 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pdx1P52946 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pdx1P52946 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pdx1P52946 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Pdx1P52946 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdx1P52946 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdx1P52946 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pdx1P52946 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pdx1P52946 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.34■□□□□ 0.05
Pdx1P52946 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdx1P52946 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.34■□□□□ 0.05
Pdx1P52946 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Pdx1P52946 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdx1P52946 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.34■□□□□ 0.05
Pdx1P52946 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.34■□□□□ 0.05
Pdx1P52946 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.34■□□□□ 0.05
Pdx1P52946 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.34■□□□□ 0.05
Pdx1P52946 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pdx1P52946 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Pdx1P52946 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Pdx1P52946 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdx1P52946 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.34■□□□□ 0.05
Pdx1P52946 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pdx1P52946 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Pdx1P52946 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdx1P52946 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdx1P52946 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
Pdx1P52946 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdx1P52946 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdx1P52946 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdx1P52946 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.34■□□□□ 0.05
Pdx1P52946 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdx1P52946 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdx1P52946 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.34■□□□□ 0.05
Pdx1P52946 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.34■□□□□ 0.05
Pdx1P52946 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pdx1P52946 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pdx1P52946 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pdx1P52946 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.33■□□□□ 0.05
Pdx1P52946 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
Pdx1P52946 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Pdx1P52946 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdx1P52946 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Pdx1P52946 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Pdx1P52946 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdx1P52946 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.33■□□□□ 0.04
Pdx1P52946 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.33■□□□□ 0.04
Pdx1P52946 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.33■□□□□ 0.04
Pdx1P52946 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.33■□□□□ 0.04
Pdx1P52946 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdx1P52946 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Pdx1P52946 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdx1P52946 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdx1P52946 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Pdx1P52946 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pdx1P52946 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdx1P52946 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pdx1P52946 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdx1P52946 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdx1P52946 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms