Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.91□□□□□ -0.34
Nkx2-1P50220 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-1P50220 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-1P50220 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC12.91□□□□□ -0.34
Nkx2-1P50220 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-1P50220 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-1P50220 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-1P50220 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-1P50220 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-1P50220 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-1P50220 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.91□□□□□ -0.34
Nkx2-1P50220 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-1P50220 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-1P50220 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-1P50220 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-1P50220 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-1P50220 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-1P50220 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.9□□□□□ -0.34
Nkx2-1P50220 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-1P50220 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
Nkx2-1P50220 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-1P50220 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-1P50220 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-1P50220 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Nkx2-1P50220 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-1P50220 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-1P50220 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-1P50220 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-1P50220 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-1P50220 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Nkx2-1P50220 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC12.9□□□□□ -0.34
Nkx2-1P50220 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-1P50220 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-1P50220 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-1P50220 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-1P50220 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Nkx2-1P50220 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.9□□□□□ -0.34
Nkx2-1P50220 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-1P50220 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-1P50220 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-1P50220 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.9□□□□□ -0.34
Nkx2-1P50220 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-1P50220 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-1P50220 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-1P50220 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.9□□□□□ -0.34
Nkx2-1P50220 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Nkx2-1P50220 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
Nkx2-1P50220 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Nkx2-1P50220 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Nkx2-1P50220 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-1P50220 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-1P50220 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.89□□□□□ -0.35
Nkx2-1P50220 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC12.89□□□□□ -0.35
Nkx2-1P50220 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-1P50220 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-1P50220 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-1P50220 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-1P50220 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.89□□□□□ -0.35
Nkx2-1P50220 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-1P50220 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-1P50220 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-1P50220 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-1P50220 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC12.89□□□□□ -0.35
Nkx2-1P50220 Gm11336-201ENSMUST00000118168 334 ntBASIC12.89□□□□□ -0.35
Nkx2-1P50220 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-1P50220 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-1P50220 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
Nkx2-1P50220 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC12.89□□□□□ -0.35
Nkx2-1P50220 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-1P50220 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-1P50220 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-1P50220 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Nkx2-1P50220 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-1P50220 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-1P50220 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-1P50220 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-1P50220 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-1P50220 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Nkx2-1P50220 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-1P50220 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-1P50220 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-1P50220 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-1P50220 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-1P50220 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-1P50220 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-1P50220 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC12.88□□□□□ -0.35
Nkx2-1P50220 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-1P50220 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-1P50220 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-1P50220 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-1P50220 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-1P50220 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-1P50220 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-1P50220 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-1P50220 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-1P50220 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-1P50220 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-1P50220 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-1P50220 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC12.88□□□□□ -0.35
Nkx2-1P50220 Gm2274-201ENSMUST00000184539 609 ntBASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms