Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
Sdc2P43407 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Sdc2P43407 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sdc2P43407 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sdc2P43407 Gm13836-201ENSMUST00000121159 501 ntBASIC17.44■□□□□ 0.38
Sdc2P43407 Olfr129-201ENSMUST00000122318 993 ntBASIC17.44■□□□□ 0.38
Sdc2P43407 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.44■□□□□ 0.38
Sdc2P43407 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sdc2P43407 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sdc2P43407 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sdc2P43407 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.44■□□□□ 0.38
Sdc2P43407 Gm7367-201ENSMUST00000057611 492 ntBASIC17.44■□□□□ 0.38
Sdc2P43407 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sdc2P43407 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Sdc2P43407 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Sdc2P43407 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.44■□□□□ 0.38
Sdc2P43407 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
Sdc2P43407 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sdc2P43407 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Sdc2P43407 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sdc2P43407 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sdc2P43407 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sdc2P43407 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sdc2P43407 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sdc2P43407 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sdc2P43407 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sdc2P43407 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sdc2P43407 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sdc2P43407 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sdc2P43407 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sdc2P43407 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sdc2P43407 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.43■□□□□ 0.38
Sdc2P43407 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Sdc2P43407 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sdc2P43407 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sdc2P43407 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.43■□□□□ 0.38
Sdc2P43407 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.43■□□□□ 0.38
Sdc2P43407 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sdc2P43407 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sdc2P43407 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sdc2P43407 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sdc2P43407 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sdc2P43407 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sdc2P43407 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sdc2P43407 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Sdc2P43407 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sdc2P43407 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Sdc2P43407 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Sdc2P43407 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sdc2P43407 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sdc2P43407 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sdc2P43407 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sdc2P43407 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Sdc2P43407 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Sdc2P43407 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
Sdc2P43407 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.42■□□□□ 0.38
Sdc2P43407 Rprl3-201ENSMUST00000157400 290 ntBASIC17.42■□□□□ 0.38
Sdc2P43407 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Sdc2P43407 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.42■□□□□ 0.38
Sdc2P43407 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sdc2P43407 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sdc2P43407 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sdc2P43407 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sdc2P43407 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sdc2P43407 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sdc2P43407 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sdc2P43407 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.42■□□□□ 0.38
Sdc2P43407 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sdc2P43407 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sdc2P43407 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sdc2P43407 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Sdc2P43407 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sdc2P43407 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Sdc2P43407 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sdc2P43407 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sdc2P43407 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Sdc2P43407 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sdc2P43407 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sdc2P43407 Prkcz2-201ENSMUST00000206136 1756 ntBASIC17.41■□□□□ 0.38
Sdc2P43407 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sdc2P43407 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Sdc2P43407 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sdc2P43407 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sdc2P43407 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.41■□□□□ 0.38
Sdc2P43407 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Sdc2P43407 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sdc2P43407 Mir3081-201ENSMUST00000175305 84 ntBASIC17.41■□□□□ 0.38
Sdc2P43407 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.41■□□□□ 0.38
Sdc2P43407 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.41■□□□□ 0.38
Sdc2P43407 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sdc2P43407 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sdc2P43407 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sdc2P43407 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sdc2P43407 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sdc2P43407 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sdc2P43407 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sdc2P43407 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sdc2P43407 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Sdc2P43407 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sdc2P43407 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms