Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hist1h1aP43275 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hist1h1aP43275 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hist1h1aP43275 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hist1h1aP43275 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hist1h1aP43275 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hist1h1aP43275 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hist1h1aP43275 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hist1h1aP43275 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.85□□□□□ -0.35
Hist1h1aP43275 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hist1h1aP43275 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.85□□□□□ -0.35
Hist1h1aP43275 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hist1h1aP43275 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Hist1h1aP43275 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hist1h1aP43275 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.85□□□□□ -0.35
Hist1h1aP43275 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hist1h1aP43275 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hist1h1aP43275 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hist1h1aP43275 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hist1h1aP43275 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hist1h1aP43275 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hist1h1aP43275 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hist1h1aP43275 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hist1h1aP43275 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.84□□□□□ -0.35
Hist1h1aP43275 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hist1h1aP43275 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hist1h1aP43275 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Hist1h1aP43275 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hist1h1aP43275 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hist1h1aP43275 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hist1h1aP43275 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hist1h1aP43275 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hist1h1aP43275 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hist1h1aP43275 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hist1h1aP43275 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Hist1h1aP43275 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hist1h1aP43275 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hist1h1aP43275 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hist1h1aP43275 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hist1h1aP43275 Gm15565-201ENSMUST00000118890 427 ntBASIC12.84□□□□□ -0.35
Hist1h1aP43275 Gm11355-201ENSMUST00000121120 306 ntBASIC12.84□□□□□ -0.35
Hist1h1aP43275 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Hist1h1aP43275 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Hist1h1aP43275 AC153881.2-201ENSMUST00000214877 204 ntBASIC12.84□□□□□ -0.35
Hist1h1aP43275 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hist1h1aP43275 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Hist1h1aP43275 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hist1h1aP43275 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Hist1h1aP43275 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hist1h1aP43275 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hist1h1aP43275 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hist1h1aP43275 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hist1h1aP43275 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Hist1h1aP43275 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hist1h1aP43275 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hist1h1aP43275 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hist1h1aP43275 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hist1h1aP43275 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hist1h1aP43275 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Hist1h1aP43275 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hist1h1aP43275 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Hist1h1aP43275 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.83□□□□□ -0.35
Hist1h1aP43275 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Hist1h1aP43275 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hist1h1aP43275 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hist1h1aP43275 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hist1h1aP43275 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hist1h1aP43275 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hist1h1aP43275 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hist1h1aP43275 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hist1h1aP43275 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hist1h1aP43275 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hist1h1aP43275 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hist1h1aP43275 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Hist1h1aP43275 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.83□□□□□ -0.36
Hist1h1aP43275 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hist1h1aP43275 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Hist1h1aP43275 Gm44430-201ENSMUST00000203376 995 ntBASIC12.83□□□□□ -0.36
Hist1h1aP43275 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12.83□□□□□ -0.36
Hist1h1aP43275 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.83□□□□□ -0.36
Hist1h1aP43275 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hist1h1aP43275 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Hist1h1aP43275 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hist1h1aP43275 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.83□□□□□ -0.36
Hist1h1aP43275 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hist1h1aP43275 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.83□□□□□ -0.36
Hist1h1aP43275 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hist1h1aP43275 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hist1h1aP43275 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.83□□□□□ -0.36
Hist1h1aP43275 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Hist1h1aP43275 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hist1h1aP43275 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.83□□□□□ -0.36
Hist1h1aP43275 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hist1h1aP43275 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hist1h1aP43275 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hist1h1aP43275 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Hist1h1aP43275 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Hist1h1aP43275 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.82□□□□□ -0.36
Hist1h1aP43275 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hist1h1aP43275 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms