Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.3□□□□□ -0.44
Rom1P32958 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.3□□□□□ -0.44
Rom1P32958 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rom1P32958 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rom1P32958 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Rom1P32958 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.3□□□□□ -0.44
Rom1P32958 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rom1P32958 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rom1P32958 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rom1P32958 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rom1P32958 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rom1P32958 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Rom1P32958 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Rom1P32958 Mir6404-201ENSMUST00000183699 94 ntBASIC12.3□□□□□ -0.44
Rom1P32958 Gm43353-201ENSMUST00000199224 1295 ntBASIC12.3□□□□□ -0.44
Rom1P32958 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC12.3□□□□□ -0.44
Rom1P32958 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC12.3□□□□□ -0.44
Rom1P32958 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC12.3□□□□□ -0.44
Rom1P32958 AC122351.1-201ENSMUST00000220467 126 ntBASIC12.3□□□□□ -0.44
Rom1P32958 Otx2os1-204ENSMUST00000227221 751 ntBASIC12.3□□□□□ -0.44
Rom1P32958 AC135637.1-201ENSMUST00000227750 365 ntBASIC12.3□□□□□ -0.44
Rom1P32958 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rom1P32958 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rom1P32958 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rom1P32958 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Rom1P32958 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rom1P32958 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rom1P32958 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rom1P32958 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rom1P32958 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rom1P32958 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rom1P32958 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.3□□□□□ -0.44
Rom1P32958 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rom1P32958 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC12.3□□□□□ -0.44
Rom1P32958 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rom1P32958 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.3□□□□□ -0.44
Rom1P32958 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rom1P32958 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.3□□□□□ -0.44
Rom1P32958 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rom1P32958 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Rom1P32958 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rom1P32958 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rom1P32958 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Rom1P32958 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rom1P32958 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Rom1P32958 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rom1P32958 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rom1P32958 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rom1P32958 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rom1P32958 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rom1P32958 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.29□□□□□ -0.44
Rom1P32958 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rom1P32958 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rom1P32958 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rom1P32958 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rom1P32958 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Rom1P32958 Gm16061-201ENSMUST00000122167 857 ntBASIC12.29□□□□□ -0.44
Rom1P32958 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Rom1P32958 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rom1P32958 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rom1P32958 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rom1P32958 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rom1P32958 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Rom1P32958 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Rom1P32958 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rom1P32958 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rom1P32958 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rom1P32958 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rom1P32958 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rom1P32958 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rom1P32958 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rom1P32958 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rom1P32958 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Rom1P32958 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rom1P32958 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rom1P32958 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC12.28□□□□□ -0.44
Rom1P32958 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Rom1P32958 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rom1P32958 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rom1P32958 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rom1P32958 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rom1P32958 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rom1P32958 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Rom1P32958 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rom1P32958 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rom1P32958 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.28□□□□□ -0.44
Rom1P32958 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Rom1P32958 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rom1P32958 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rom1P32958 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Rom1P32958 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rom1P32958 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rom1P32958 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rom1P32958 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rom1P32958 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.28□□□□□ -0.44
Rom1P32958 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC12.28□□□□□ -0.44
Rom1P32958 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rom1P32958 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rom1P32958 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rom1P32958 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms