Protein–RNA interactions for Protein: P27790

Cenpb, Major centromere autoantigen B, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CenpbP27790 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CenpbP27790 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.99■□□□□ 0.95
CenpbP27790 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.99■□□□□ 0.95
CenpbP27790 Zfp783-201ENSMUST00000095946 670 ntBASIC20.99■□□□□ 0.95
CenpbP27790 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CenpbP27790 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CenpbP27790 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CenpbP27790 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CenpbP27790 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CenpbP27790 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CenpbP27790 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CenpbP27790 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CenpbP27790 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CenpbP27790 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
CenpbP27790 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CenpbP27790 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC20.98■□□□□ 0.95
CenpbP27790 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CenpbP27790 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CenpbP27790 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CenpbP27790 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CenpbP27790 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CenpbP27790 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
CenpbP27790 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CenpbP27790 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC20.98■□□□□ 0.95
CenpbP27790 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CenpbP27790 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.98■□□□□ 0.95
CenpbP27790 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CenpbP27790 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CenpbP27790 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CenpbP27790 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CenpbP27790 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CenpbP27790 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CenpbP27790 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CenpbP27790 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CenpbP27790 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CenpbP27790 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CenpbP27790 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC20.97■□□□□ 0.95
CenpbP27790 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CenpbP27790 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CenpbP27790 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CenpbP27790 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CenpbP27790 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CenpbP27790 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CenpbP27790 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CenpbP27790 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC20.97■□□□□ 0.95
CenpbP27790 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CenpbP27790 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CenpbP27790 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CenpbP27790 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CenpbP27790 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.97■□□□□ 0.95
CenpbP27790 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CenpbP27790 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC20.97■□□□□ 0.95
CenpbP27790 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CenpbP27790 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CenpbP27790 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CenpbP27790 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CenpbP27790 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CenpbP27790 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.97■□□□□ 0.95
CenpbP27790 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CenpbP27790 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CenpbP27790 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CenpbP27790 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CenpbP27790 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CenpbP27790 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CenpbP27790 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CenpbP27790 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
CenpbP27790 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CenpbP27790 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CenpbP27790 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
CenpbP27790 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CenpbP27790 Gm38285-201ENSMUST00000192928 922 ntBASIC20.96■□□□□ 0.95
CenpbP27790 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.96■□□□□ 0.95
CenpbP27790 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CenpbP27790 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.96■□□□□ 0.95
CenpbP27790 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CenpbP27790 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC20.96■□□□□ 0.95
CenpbP27790 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CenpbP27790 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CenpbP27790 Gm5422-201ENSMUST00000050717 2721 ntBASIC20.96■□□□□ 0.95
CenpbP27790 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CenpbP27790 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CenpbP27790 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CenpbP27790 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CenpbP27790 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CenpbP27790 AC108858.1-201ENSMUST00000228461 1498 ntBASIC20.95■□□□□ 0.94
CenpbP27790 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CenpbP27790 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CenpbP27790 Gm38197-201ENSMUST00000192320 2122 ntBASIC20.95■□□□□ 0.94
CenpbP27790 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CenpbP27790 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CenpbP27790 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CenpbP27790 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CenpbP27790 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CenpbP27790 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.95■□□□□ 0.94
CenpbP27790 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CenpbP27790 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC20.95■□□□□ 0.94
CenpbP27790 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CenpbP27790 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC20.95■□□□□ 0.94
CenpbP27790 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.95■□□□□ 0.94
CenpbP27790 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms