Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Pde6bP23440 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.95■□□□□ 0.3
Pde6bP23440 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pde6bP23440 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Pde6bP23440 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Pde6bP23440 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pde6bP23440 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pde6bP23440 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pde6bP23440 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.95■□□□□ 0.3
Pde6bP23440 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pde6bP23440 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Pde6bP23440 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pde6bP23440 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Pde6bP23440 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pde6bP23440 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pde6bP23440 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.94■□□□□ 0.3
Pde6bP23440 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.94■□□□□ 0.3
Pde6bP23440 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.94■□□□□ 0.3
Pde6bP23440 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Pde6bP23440 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Pde6bP23440 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.94■□□□□ 0.3
Pde6bP23440 Gm15358-201ENSMUST00000119249 520 ntBASIC16.94■□□□□ 0.3
Pde6bP23440 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.94■□□□□ 0.3
Pde6bP23440 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.94■□□□□ 0.3
Pde6bP23440 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pde6bP23440 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pde6bP23440 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pde6bP23440 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pde6bP23440 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pde6bP23440 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pde6bP23440 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pde6bP23440 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pde6bP23440 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pde6bP23440 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pde6bP23440 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
Pde6bP23440 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pde6bP23440 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pde6bP23440 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pde6bP23440 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
Pde6bP23440 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pde6bP23440 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.93■□□□□ 0.3
Pde6bP23440 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Pde6bP23440 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pde6bP23440 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.93■□□□□ 0.3
Pde6bP23440 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pde6bP23440 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.93■□□□□ 0.3
Pde6bP23440 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pde6bP23440 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pde6bP23440 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pde6bP23440 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pde6bP23440 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.93■□□□□ 0.3
Pde6bP23440 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pde6bP23440 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Pde6bP23440 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pde6bP23440 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pde6bP23440 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pde6bP23440 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pde6bP23440 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Pde6bP23440 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pde6bP23440 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pde6bP23440 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pde6bP23440 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.92■□□□□ 0.3
Pde6bP23440 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pde6bP23440 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.92■□□□□ 0.3
Pde6bP23440 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pde6bP23440 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pde6bP23440 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Pde6bP23440 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pde6bP23440 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pde6bP23440 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Pde6bP23440 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pde6bP23440 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.92■□□□□ 0.3
Pde6bP23440 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Pde6bP23440 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pde6bP23440 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Pde6bP23440 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Pde6bP23440 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pde6bP23440 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pde6bP23440 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.92■□□□□ 0.3
Pde6bP23440 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Pde6bP23440 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pde6bP23440 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Pde6bP23440 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Pde6bP23440 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.91■□□□□ 0.3
Pde6bP23440 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pde6bP23440 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pde6bP23440 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pde6bP23440 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pde6bP23440 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pde6bP23440 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pde6bP23440 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.91■□□□□ 0.3
Pde6bP23440 Gm26308-201ENSMUST00000157768 69 ntBASIC16.91■□□□□ 0.3
Pde6bP23440 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Pde6bP23440 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pde6bP23440 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Pde6bP23440 Gm7787-201ENSMUST00000216858 688 ntBASIC16.91■□□□□ 0.3
Pde6bP23440 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pde6bP23440 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pde6bP23440 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pde6bP23440 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms