Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tpm3P21107 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Tpm3P21107 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tpm3P21107 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tpm3P21107 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tpm3P21107 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Tpm3P21107 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Tpm3P21107 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.42■□□□□ 0.38
Tpm3P21107 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Tpm3P21107 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Tpm3P21107 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Tpm3P21107 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tpm3P21107 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Tpm3P21107 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.42■□□□□ 0.38
Tpm3P21107 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.42■□□□□ 0.38
Tpm3P21107 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tpm3P21107 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
Tpm3P21107 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tpm3P21107 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Tpm3P21107 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Tpm3P21107 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tpm3P21107 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tpm3P21107 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tpm3P21107 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Tpm3P21107 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tpm3P21107 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.41■□□□□ 0.38
Tpm3P21107 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.41■□□□□ 0.38
Tpm3P21107 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.41■□□□□ 0.38
Tpm3P21107 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.41■□□□□ 0.38
Tpm3P21107 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Tpm3P21107 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tpm3P21107 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Tpm3P21107 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC17.41■□□□□ 0.38
Tpm3P21107 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC17.41■□□□□ 0.38
Tpm3P21107 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Tpm3P21107 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tpm3P21107 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Tpm3P21107 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Tpm3P21107 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Tpm3P21107 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.41■□□□□ 0.38
Tpm3P21107 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Tpm3P21107 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.4■□□□□ 0.38
Tpm3P21107 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tpm3P21107 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tpm3P21107 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tpm3P21107 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tpm3P21107 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Tpm3P21107 Mir1199-201ENSMUST00000117015 119 ntBASIC17.4■□□□□ 0.38
Tpm3P21107 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tpm3P21107 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Tpm3P21107 Gm29707-201ENSMUST00000196325 491 ntBASIC17.4■□□□□ 0.38
Tpm3P21107 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.4■□□□□ 0.38
Tpm3P21107 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Tpm3P21107 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tpm3P21107 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.4■□□□□ 0.38
Tpm3P21107 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tpm3P21107 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.4■□□□□ 0.38
Tpm3P21107 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tpm3P21107 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Tpm3P21107 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC17.4■□□□□ 0.38
Tpm3P21107 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.4■□□□□ 0.38
Tpm3P21107 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tpm3P21107 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tpm3P21107 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tpm3P21107 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tpm3P21107 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Tpm3P21107 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tpm3P21107 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Tpm3P21107 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tpm3P21107 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tpm3P21107 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Tpm3P21107 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Tpm3P21107 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Tpm3P21107 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.39■□□□□ 0.37
Tpm3P21107 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Tpm3P21107 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tpm3P21107 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tpm3P21107 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Tpm3P21107 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.39■□□□□ 0.37
Tpm3P21107 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Tpm3P21107 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tpm3P21107 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC17.39■□□□□ 0.37
Tpm3P21107 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tpm3P21107 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tpm3P21107 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Tpm3P21107 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tpm3P21107 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Tpm3P21107 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.39■□□□□ 0.37
Tpm3P21107 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.39■□□□□ 0.37
Tpm3P21107 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tpm3P21107 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Tpm3P21107 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tpm3P21107 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tpm3P21107 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tpm3P21107 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Tpm3P21107 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tpm3P21107 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC17.39■□□□□ 0.37
Tpm3P21107 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Tpm3P21107 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tpm3P21107 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms