Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfrsf9P20334 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfrsf9P20334 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf9P20334 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC12.69□□□□□ -0.38
Tnfrsf9P20334 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC12.69□□□□□ -0.38
Tnfrsf9P20334 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf9P20334 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf9P20334 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf9P20334 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Tnfrsf9P20334 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf9P20334 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf9P20334 Gm36858-201ENSMUST00000194501 2391 ntBASIC12.69□□□□□ -0.38
Tnfrsf9P20334 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf9P20334 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf9P20334 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Tnfrsf9P20334 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.69□□□□□ -0.38
Tnfrsf9P20334 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf9P20334 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.69□□□□□ -0.38
Tnfrsf9P20334 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC12.69□□□□□ -0.38
Tnfrsf9P20334 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf9P20334 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf9P20334 Gm7230-201ENSMUST00000173026 815 ntBASIC12.69□□□□□ -0.38
Tnfrsf9P20334 Gm6089-201ENSMUST00000197666 938 ntBASIC12.69□□□□□ -0.38
Tnfrsf9P20334 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf9P20334 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf9P20334 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Tnfrsf9P20334 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.69□□□□□ -0.38
Tnfrsf9P20334 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf9P20334 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf9P20334 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf9P20334 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf9P20334 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf9P20334 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf9P20334 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf9P20334 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf9P20334 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf9P20334 Tfap2a-209ENSMUST00000225180 1828 ntBASIC12.69□□□□□ -0.38
Tnfrsf9P20334 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf9P20334 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf9P20334 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.69□□□□□ -0.38
Tnfrsf9P20334 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf9P20334 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf9P20334 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf9P20334 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf9P20334 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf9P20334 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Tnfrsf9P20334 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Tnfrsf9P20334 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf9P20334 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC12.68□□□□□ -0.38
Tnfrsf9P20334 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf9P20334 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf9P20334 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf9P20334 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Tnfrsf9P20334 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Tnfrsf9P20334 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf9P20334 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.68□□□□□ -0.38
Tnfrsf9P20334 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC12.68□□□□□ -0.38
Tnfrsf9P20334 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC12.68□□□□□ -0.38
Tnfrsf9P20334 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.68□□□□□ -0.38
Tnfrsf9P20334 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.68□□□□□ -0.38
Tnfrsf9P20334 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.68□□□□□ -0.38
Tnfrsf9P20334 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.68□□□□□ -0.38
Tnfrsf9P20334 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.68□□□□□ -0.38
Tnfrsf9P20334 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf9P20334 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf9P20334 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf9P20334 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Tnfrsf9P20334 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf9P20334 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf9P20334 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf9P20334 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf9P20334 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf9P20334 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Tnfrsf9P20334 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Tnfrsf9P20334 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf9P20334 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC12.68□□□□□ -0.38
Tnfrsf9P20334 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf9P20334 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC12.68□□□□□ -0.38
Tnfrsf9P20334 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf9P20334 Zfp264-201ENSMUST00000208656 1563 ntBASIC12.68□□□□□ -0.38
Tnfrsf9P20334 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf9P20334 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf9P20334 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf9P20334 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf9P20334 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf9P20334 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfrsf9P20334 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfrsf9P20334 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfrsf9P20334 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfrsf9P20334 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfrsf9P20334 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfrsf9P20334 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfrsf9P20334 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfrsf9P20334 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfrsf9P20334 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.67□□□□□ -0.38
Tnfrsf9P20334 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfrsf9P20334 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfrsf9P20334 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfrsf9P20334 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.67□□□□□ -0.38
Tnfrsf9P20334 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms