Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
P20040 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
P20040 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
P20040 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.83□□□□□ -0.2
P20040 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
P20040 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.83□□□□□ -0.2
P20040 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
P20040 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
P20040 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
P20040 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
P20040 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
P20040 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
P20040 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
P20040 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
P20040 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
P20040 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
P20040 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.82□□□□□ -0.2
P20040 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
P20040 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
P20040 Gm15442-201ENSMUST00000117905 1527 ntBASIC13.82□□□□□ -0.2
P20040 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
P20040 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC13.82□□□□□ -0.2
P20040 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
P20040 AC159205.3-201ENSMUST00000224614 874 ntBASIC13.82□□□□□ -0.2
P20040 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
P20040 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
P20040 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
P20040 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
P20040 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
P20040 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
P20040 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
P20040 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
P20040 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.82□□□□□ -0.2
P20040 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
P20040 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
P20040 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
P20040 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.81□□□□□ -0.2
P20040 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
P20040 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
P20040 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
P20040 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
P20040 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
P20040 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.81□□□□□ -0.2
P20040 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.81□□□□□ -0.2
P20040 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
P20040 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
P20040 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
P20040 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
P20040 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13.81□□□□□ -0.2
P20040 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
P20040 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.81□□□□□ -0.2
P20040 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
P20040 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
P20040 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
P20040 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
P20040 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
P20040 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
P20040 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
P20040 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
P20040 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
P20040 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
P20040 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
P20040 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
P20040 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
P20040 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
P20040 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
P20040 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
P20040 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
P20040 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
P20040 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
P20040 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
P20040 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
P20040 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
P20040 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
P20040 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
P20040 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
P20040 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
P20040 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
P20040 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
P20040 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
P20040 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
P20040 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
P20040 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
P20040 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
P20040 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
P20040 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
P20040 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
P20040 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
P20040 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.8□□□□□ -0.2
P20040 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
P20040 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
P20040 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
P20040 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
P20040 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
P20040 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
P20040 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
P20040 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
P20040 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
P20040 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.79□□□□□ -0.2
P20040 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms