Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn1P18608 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC14.22□□□□□ -0.13
Hmgn1P18608 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.22□□□□□ -0.13
Hmgn1P18608 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.22□□□□□ -0.13
Hmgn1P18608 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.22□□□□□ -0.13
Hmgn1P18608 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.22□□□□□ -0.13
Hmgn1P18608 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn1P18608 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.22□□□□□ -0.13
Hmgn1P18608 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn1P18608 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn1P18608 Gm9987-201ENSMUST00000069768 567 ntBASIC14.22□□□□□ -0.13
Hmgn1P18608 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Hmgn1P18608 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn1P18608 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn1P18608 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Hmgn1P18608 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn1P18608 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn1P18608 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn1P18608 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn1P18608 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn1P18608 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn1P18608 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn1P18608 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn1P18608 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgn1P18608 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.21□□□□□ -0.13
Hmgn1P18608 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgn1P18608 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgn1P18608 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Hmgn1P18608 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgn1P18608 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Hmgn1P18608 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgn1P18608 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Hmgn1P18608 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Hmgn1P18608 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgn1P18608 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.13
Hmgn1P18608 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgn1P18608 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.21□□□□□ -0.13
Hmgn1P18608 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgn1P18608 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgn1P18608 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgn1P18608 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgn1P18608 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgn1P18608 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgn1P18608 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hmgn1P18608 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hmgn1P18608 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hmgn1P18608 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hmgn1P18608 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Hmgn1P18608 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hmgn1P18608 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hmgn1P18608 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Hmgn1P18608 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgn1P18608 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgn1P18608 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Hmgn1P18608 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.2□□□□□ -0.14
Hmgn1P18608 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Hmgn1P18608 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgn1P18608 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgn1P18608 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.2□□□□□ -0.14
Hmgn1P18608 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.2□□□□□ -0.14
Hmgn1P18608 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.2□□□□□ -0.14
Hmgn1P18608 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.2□□□□□ -0.14
Hmgn1P18608 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Hmgn1P18608 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgn1P18608 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgn1P18608 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgn1P18608 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgn1P18608 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgn1P18608 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgn1P18608 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgn1P18608 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.2□□□□□ -0.14
Hmgn1P18608 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.2□□□□□ -0.14
Hmgn1P18608 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.2□□□□□ -0.14
Hmgn1P18608 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgn1P18608 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.2□□□□□ -0.14
Hmgn1P18608 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgn1P18608 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgn1P18608 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgn1P18608 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgn1P18608 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgn1P18608 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Hmgn1P18608 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgn1P18608 Gm7889-201ENSMUST00000185591 958 ntBASIC14.19□□□□□ -0.14
Hmgn1P18608 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgn1P18608 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgn1P18608 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgn1P18608 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgn1P18608 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgn1P18608 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgn1P18608 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgn1P18608 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Hmgn1P18608 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgn1P18608 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgn1P18608 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgn1P18608 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Hmgn1P18608 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgn1P18608 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Hmgn1P18608 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgn1P18608 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgn1P18608 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms