Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx1P18111 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx1P18111 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx1P18111 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx1P18111 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Cdx1P18111 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx1P18111 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cdx1P18111 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx1P18111 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx1P18111 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx1P18111 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx1P18111 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx1P18111 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Cdx1P18111 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cdx1P18111 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Cdx1P18111 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cdx1P18111 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cdx1P18111 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cdx1P18111 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cdx1P18111 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdx1P18111 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cdx1P18111 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cdx1P18111 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Cdx1P18111 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC12.58□□□□□ -0.4
Cdx1P18111 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdx1P18111 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.58□□□□□ -0.4
Cdx1P18111 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Cdx1P18111 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdx1P18111 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC12.58□□□□□ -0.4
Cdx1P18111 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdx1P18111 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cdx1P18111 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdx1P18111 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cdx1P18111 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Cdx1P18111 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdx1P18111 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Cdx1P18111 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdx1P18111 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdx1P18111 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdx1P18111 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdx1P18111 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cdx1P18111 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdx1P18111 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdx1P18111 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdx1P18111 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx1P18111 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx1P18111 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx1P18111 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx1P18111 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx1P18111 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.57□□□□□ -0.4
Cdx1P18111 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.57□□□□□ -0.4
Cdx1P18111 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.57□□□□□ -0.4
Cdx1P18111 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx1P18111 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx1P18111 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx1P18111 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx1P18111 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx1P18111 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx1P18111 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx1P18111 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx1P18111 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx1P18111 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx1P18111 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx1P18111 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx1P18111 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Cdx1P18111 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx1P18111 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx1P18111 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Cdx1P18111 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx1P18111 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx1P18111 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx1P18111 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx1P18111 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Cdx1P18111 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx1P18111 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC12.57□□□□□ -0.4
Cdx1P18111 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx1P18111 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx1P18111 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx1P18111 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx1P18111 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx1P18111 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx1P18111 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx1P18111 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx1P18111 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC12.56□□□□□ -0.4
Cdx1P18111 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx1P18111 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx1P18111 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx1P18111 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx1P18111 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx1P18111 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx1P18111 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Cdx1P18111 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx1P18111 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx1P18111 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx1P18111 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.56□□□□□ -0.4
Cdx1P18111 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx1P18111 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.56□□□□□ -0.4
Cdx1P18111 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx1P18111 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx1P18111 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms