Protein–RNA interactions for Protein: P15533

Trim30a, Tripartite motif-containing protein 30A, mousemouse

Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30aP15533 Gm26524-201ENSMUST00000192339 390 ntBASIC17.12■□□□□ 0.33
Trim30aP15533 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.12■□□□□ 0.33
Trim30aP15533 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.12■□□□□ 0.33
Trim30aP15533 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.12■□□□□ 0.33
Trim30aP15533 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.12■□□□□ 0.33
Trim30aP15533 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim30aP15533 Gm9731-201ENSMUST00000209480 747 ntBASIC17.12■□□□□ 0.33
Trim30aP15533 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim30aP15533 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim30aP15533 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim30aP15533 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trim30aP15533 Gm37019-201ENSMUST00000192133 2134 ntBASIC17.12■□□□□ 0.33
Trim30aP15533 Gm38391-201ENSMUST00000191720 4069 ntBASIC17.12■□□□□ 0.33
Trim30aP15533 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim30aP15533 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim30aP15533 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim30aP15533 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim30aP15533 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim30aP15533 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trim30aP15533 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim30aP15533 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim30aP15533 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim30aP15533 Gm12382-201ENSMUST00000122005 922 ntBASIC17.11■□□□□ 0.33
Trim30aP15533 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim30aP15533 Gm42545-201ENSMUST00000202755 922 ntBASIC17.11■□□□□ 0.33
Trim30aP15533 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.11■□□□□ 0.33
Trim30aP15533 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim30aP15533 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim30aP15533 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim30aP15533 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.11■□□□□ 0.33
Trim30aP15533 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.11■□□□□ 0.33
Trim30aP15533 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trim30aP15533 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Trim30aP15533 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Trim30aP15533 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim30aP15533 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim30aP15533 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim30aP15533 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim30aP15533 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Trim30aP15533 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim30aP15533 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim30aP15533 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim30aP15533 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim30aP15533 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim30aP15533 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
Trim30aP15533 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim30aP15533 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim30aP15533 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim30aP15533 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Trim30aP15533 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim30aP15533 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim30aP15533 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim30aP15533 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim30aP15533 Gm38577-201ENSMUST00000221531 4545 ntBASIC17.1■□□□□ 0.33
Trim30aP15533 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
Trim30aP15533 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Trim30aP15533 Gm18025-201ENSMUST00000221733 862 ntBASIC17.1■□□□□ 0.33
Trim30aP15533 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Trim30aP15533 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim30aP15533 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim30aP15533 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim30aP15533 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC17.1■□□□□ 0.33
Trim30aP15533 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim30aP15533 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim30aP15533 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim30aP15533 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim30aP15533 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim30aP15533 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim30aP15533 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim30aP15533 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim30aP15533 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim30aP15533 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim30aP15533 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim30aP15533 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trim30aP15533 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim30aP15533 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC17.09■□□□□ 0.33
Trim30aP15533 Rab3c-203ENSMUST00000224180 967 ntBASIC17.09■□□□□ 0.33
Trim30aP15533 Gm4968-201ENSMUST00000071458 858 ntBASIC17.09■□□□□ 0.33
Trim30aP15533 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Trim30aP15533 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim30aP15533 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
Trim30aP15533 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Trim30aP15533 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim30aP15533 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim30aP15533 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim30aP15533 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim30aP15533 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim30aP15533 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim30aP15533 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Trim30aP15533 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim30aP15533 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim30aP15533 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim30aP15533 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim30aP15533 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim30aP15533 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim30aP15533 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim30aP15533 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim30aP15533 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim30aP15533 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Trim30aP15533 Gm36967-201ENSMUST00000193814 266 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms