Protein–RNA interactions for Protein: P15379

Cd44, CD44 antigen, mousemouse

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44P15379 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cd44P15379 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cd44P15379 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cd44P15379 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cd44P15379 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cd44P15379 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cd44P15379 Gm45328-201ENSMUST00000210942 917 ntBASIC16.31■□□□□ 0.2
Cd44P15379 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cd44P15379 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cd44P15379 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cd44P15379 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cd44P15379 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cd44P15379 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cd44P15379 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cd44P15379 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cd44P15379 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cd44P15379 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cd44P15379 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
Cd44P15379 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cd44P15379 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd44P15379 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Cd44P15379 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd44P15379 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd44P15379 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd44P15379 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd44P15379 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd44P15379 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd44P15379 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd44P15379 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd44P15379 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd44P15379 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd44P15379 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd44P15379 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.3■□□□□ 0.2
Cd44P15379 Olfr129-201ENSMUST00000122318 993 ntBASIC16.3■□□□□ 0.2
Cd44P15379 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cd44P15379 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.3■□□□□ 0.2
Cd44P15379 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.3■□□□□ 0.2
Cd44P15379 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Cd44P15379 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cd44P15379 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd44P15379 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd44P15379 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.3■□□□□ 0.2
Cd44P15379 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd44P15379 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd44P15379 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd44P15379 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Cd44P15379 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd44P15379 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd44P15379 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd44P15379 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd44P15379 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd44P15379 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd44P15379 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd44P15379 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.29■□□□□ 0.2
Cd44P15379 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cd44P15379 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cd44P15379 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cd44P15379 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd44P15379 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cd44P15379 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cd44P15379 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.29■□□□□ 0.2
Cd44P15379 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd44P15379 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd44P15379 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Cd44P15379 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd44P15379 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd44P15379 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd44P15379 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd44P15379 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd44P15379 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.29■□□□□ 0.2
Cd44P15379 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd44P15379 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd44P15379 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cd44P15379 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd44P15379 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd44P15379 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cd44P15379 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.28■□□□□ 0.2
Cd44P15379 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cd44P15379 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.28■□□□□ 0.2
Cd44P15379 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.28■□□□□ 0.2
Cd44P15379 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.28■□□□□ 0.2
Cd44P15379 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.28■□□□□ 0.2
Cd44P15379 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.28■□□□□ 0.2
Cd44P15379 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cd44P15379 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd44P15379 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd44P15379 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd44P15379 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.28■□□□□ 0.2
Cd44P15379 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.28■□□□□ 0.2
Cd44P15379 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.28■□□□□ 0.2
Cd44P15379 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.28■□□□□ 0.2
Cd44P15379 Gm8825-201ENSMUST00000182565 998 ntBASIC16.28■□□□□ 0.2
Cd44P15379 Gm4518-201ENSMUST00000182638 718 ntBASIC16.28■□□□□ 0.2
Cd44P15379 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.28■□□□□ 0.2
Cd44P15379 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.28■□□□□ 0.2
Cd44P15379 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.28■□□□□ 0.2
Cd44P15379 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd44P15379 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.28■□□□□ 0.2
Cd44P15379 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd44P15379 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms