Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cntn1P12960 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.88□□□□□ -0.03
Cntn1P12960 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cntn1P12960 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.88□□□□□ -0.03
Cntn1P12960 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cntn1P12960 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Cntn1P12960 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
Cntn1P12960 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Cntn1P12960 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.88□□□□□ -0.03
Cntn1P12960 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.88□□□□□ -0.03
Cntn1P12960 Gm14140-201ENSMUST00000119999 995 ntBASIC14.88□□□□□ -0.03
Cntn1P12960 Gm11764-201ENSMUST00000120221 623 ntBASIC14.88□□□□□ -0.03
Cntn1P12960 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cntn1P12960 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
Cntn1P12960 Gm37153-201ENSMUST00000193637 231 ntBASIC14.88□□□□□ -0.03
Cntn1P12960 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.88□□□□□ -0.03
Cntn1P12960 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.88□□□□□ -0.03
Cntn1P12960 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cntn1P12960 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.88□□□□□ -0.03
Cntn1P12960 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cntn1P12960 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Cntn1P12960 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cntn1P12960 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cntn1P12960 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cntn1P12960 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cntn1P12960 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cntn1P12960 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.87□□□□□ -0.03
Cntn1P12960 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cntn1P12960 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cntn1P12960 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cntn1P12960 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.87□□□□□ -0.03
Cntn1P12960 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cntn1P12960 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cntn1P12960 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cntn1P12960 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cntn1P12960 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Cntn1P12960 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.87□□□□□ -0.03
Cntn1P12960 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Cntn1P12960 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cntn1P12960 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.87□□□□□ -0.03
Cntn1P12960 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cntn1P12960 Gm45167-201ENSMUST00000208007 322 ntBASIC14.87□□□□□ -0.03
Cntn1P12960 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Cntn1P12960 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cntn1P12960 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cntn1P12960 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cntn1P12960 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cntn1P12960 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cntn1P12960 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cntn1P12960 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cntn1P12960 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cntn1P12960 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cntn1P12960 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cntn1P12960 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cntn1P12960 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cntn1P12960 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cntn1P12960 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.86□□□□□ -0.03
Cntn1P12960 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cntn1P12960 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Cntn1P12960 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cntn1P12960 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cntn1P12960 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.86□□□□□ -0.03
Cntn1P12960 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cntn1P12960 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.86□□□□□ -0.03
Cntn1P12960 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cntn1P12960 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cntn1P12960 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Cntn1P12960 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Cntn1P12960 Gm11779-201ENSMUST00000118541 368 ntBASIC14.86□□□□□ -0.03
Cntn1P12960 Gm12260-201ENSMUST00000122447 411 ntBASIC14.86□□□□□ -0.03
Cntn1P12960 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cntn1P12960 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cntn1P12960 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cntn1P12960 Gm8000-201ENSMUST00000188378 592 ntBASIC14.86□□□□□ -0.03
Cntn1P12960 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.86□□□□□ -0.03
Cntn1P12960 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.86□□□□□ -0.03
Cntn1P12960 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.86□□□□□ -0.03
Cntn1P12960 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.86□□□□□ -0.03
Cntn1P12960 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cntn1P12960 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.86□□□□□ -0.03
Cntn1P12960 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cntn1P12960 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.86□□□□□ -0.03
Cntn1P12960 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cntn1P12960 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cntn1P12960 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cntn1P12960 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cntn1P12960 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cntn1P12960 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Cntn1P12960 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cntn1P12960 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cntn1P12960 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cntn1P12960 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cntn1P12960 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.86□□□□□ -0.03
Cntn1P12960 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cntn1P12960 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cntn1P12960 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Cntn1P12960 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cntn1P12960 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cntn1P12960 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cntn1P12960 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms