Protein–RNA interactions for Protein: P10287

Cdh3, Cadherin-3, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh3P10287 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh3P10287 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh3P10287 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh3P10287 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh3P10287 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Cdh3P10287 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh3P10287 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh3P10287 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.4□□□□□ -0.1
Cdh3P10287 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh3P10287 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh3P10287 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh3P10287 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh3P10287 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh3P10287 Gm14859-201ENSMUST00000117752 357 ntBASIC14.4□□□□□ -0.1
Cdh3P10287 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.4□□□□□ -0.1
Cdh3P10287 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.4□□□□□ -0.1
Cdh3P10287 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Cdh3P10287 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cdh3P10287 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cdh3P10287 Gm7367-201ENSMUST00000057611 492 ntBASIC14.4□□□□□ -0.1
Cdh3P10287 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh3P10287 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh3P10287 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh3P10287 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh3P10287 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cdh3P10287 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh3P10287 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh3P10287 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh3P10287 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh3P10287 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh3P10287 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh3P10287 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh3P10287 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh3P10287 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cdh3P10287 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh3P10287 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.39□□□□□ -0.11
Cdh3P10287 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh3P10287 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cdh3P10287 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh3P10287 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh3P10287 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cdh3P10287 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh3P10287 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh3P10287 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh3P10287 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh3P10287 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh3P10287 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh3P10287 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.39□□□□□ -0.11
Cdh3P10287 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh3P10287 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh3P10287 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh3P10287 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh3P10287 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Cdh3P10287 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cdh3P10287 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh3P10287 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh3P10287 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh3P10287 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cdh3P10287 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh3P10287 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh3P10287 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cdh3P10287 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh3P10287 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh3P10287 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh3P10287 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh3P10287 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh3P10287 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh3P10287 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh3P10287 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh3P10287 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh3P10287 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh3P10287 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cdh3P10287 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh3P10287 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh3P10287 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh3P10287 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Cdh3P10287 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh3P10287 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh3P10287 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.38□□□□□ -0.11
Cdh3P10287 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cdh3P10287 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.38□□□□□ -0.11
Cdh3P10287 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.38□□□□□ -0.11
Cdh3P10287 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh3P10287 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh3P10287 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh3P10287 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh3P10287 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh3P10287 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh3P10287 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh3P10287 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh3P10287 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh3P10287 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh3P10287 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh3P10287 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
Cdh3P10287 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh3P10287 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cdh3P10287 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh3P10287 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh3P10287 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh3P10287 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms