Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccl1P10146 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccl1P10146 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccl1P10146 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccl1P10146 Gm12933-201ENSMUST00000120203 872 ntBASIC12.09□□□□□ -0.47
Ccl1P10146 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ccl1P10146 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccl1P10146 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Ccl1P10146 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccl1P10146 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccl1P10146 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.09□□□□□ -0.47
Ccl1P10146 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccl1P10146 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccl1P10146 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccl1P10146 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ccl1P10146 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccl1P10146 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccl1P10146 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccl1P10146 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC12.08□□□□□ -0.47
Ccl1P10146 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Ccl1P10146 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Ccl1P10146 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccl1P10146 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ccl1P10146 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccl1P10146 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccl1P10146 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccl1P10146 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccl1P10146 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccl1P10146 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccl1P10146 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccl1P10146 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccl1P10146 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccl1P10146 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ccl1P10146 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccl1P10146 Gm7712-202ENSMUST00000222331 1510 ntBASIC12.08□□□□□ -0.48
Ccl1P10146 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccl1P10146 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Ccl1P10146 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC12.08□□□□□ -0.48
Ccl1P10146 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC12.08□□□□□ -0.48
Ccl1P10146 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccl1P10146 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ccl1P10146 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC12.08□□□□□ -0.48
Ccl1P10146 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ccl1P10146 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Ccl1P10146 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC12.08□□□□□ -0.48
Ccl1P10146 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ccl1P10146 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccl1P10146 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.08□□□□□ -0.48
Ccl1P10146 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.08□□□□□ -0.48
Ccl1P10146 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccl1P10146 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.07□□□□□ -0.48
Ccl1P10146 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ccl1P10146 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl1P10146 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl1P10146 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl1P10146 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl1P10146 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl1P10146 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Ccl1P10146 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl1P10146 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl1P10146 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Ccl1P10146 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl1P10146 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl1P10146 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl1P10146 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl1P10146 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC12.07□□□□□ -0.48
Ccl1P10146 Gm44450-201ENSMUST00000199528 114 ntBASIC12.07□□□□□ -0.48
Ccl1P10146 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl1P10146 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl1P10146 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl1P10146 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl1P10146 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl1P10146 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl1P10146 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl1P10146 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl1P10146 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl1P10146 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ccl1P10146 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl1P10146 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl1P10146 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ccl1P10146 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ccl1P10146 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl1P10146 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl1P10146 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl1P10146 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl1P10146 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.07□□□□□ -0.48
Ccl1P10146 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl1P10146 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl1P10146 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl1P10146 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl1P10146 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl1P10146 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl1P10146 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl1P10146 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl1P10146 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl1P10146 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Ccl1P10146 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl1P10146 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl1P10146 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ccl1P10146 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms