Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smim1P0C8K7 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC10.73□□□□□ -0.69
Smim1P0C8K7 Gm7514-201ENSMUST00000209475 934 ntBASIC10.73□□□□□ -0.69
Smim1P0C8K7 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Smim1P0C8K7 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smim1P0C8K7 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smim1P0C8K7 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smim1P0C8K7 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC10.73□□□□□ -0.69
Smim1P0C8K7 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smim1P0C8K7 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smim1P0C8K7 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smim1P0C8K7 Gm9947-201ENSMUST00000067599 2920 ntBASIC10.73□□□□□ -0.69
Smim1P0C8K7 Ankra2-208ENSMUST00000226100 1476 ntBASIC10.73□□□□□ -0.69
Smim1P0C8K7 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smim1P0C8K7 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Smim1P0C8K7 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smim1P0C8K7 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smim1P0C8K7 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smim1P0C8K7 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smim1P0C8K7 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smim1P0C8K7 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smim1P0C8K7 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smim1P0C8K7 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smim1P0C8K7 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smim1P0C8K7 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC10.72□□□□□ -0.69
Smim1P0C8K7 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smim1P0C8K7 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smim1P0C8K7 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smim1P0C8K7 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smim1P0C8K7 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smim1P0C8K7 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smim1P0C8K7 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smim1P0C8K7 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smim1P0C8K7 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smim1P0C8K7 Gm10517-202ENSMUST00000192970 758 ntBASIC10.72□□□□□ -0.69
Smim1P0C8K7 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
Smim1P0C8K7 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smim1P0C8K7 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smim1P0C8K7 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Smim1P0C8K7 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smim1P0C8K7 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC10.72□□□□□ -0.69
Smim1P0C8K7 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC10.72□□□□□ -0.69
Smim1P0C8K7 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smim1P0C8K7 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smim1P0C8K7 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smim1P0C8K7 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smim1P0C8K7 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smim1P0C8K7 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smim1P0C8K7 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC10.72□□□□□ -0.69
Smim1P0C8K7 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smim1P0C8K7 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Smim1P0C8K7 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smim1P0C8K7 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Smim1P0C8K7 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC10.72□□□□□ -0.69
Smim1P0C8K7 Gm26513-201ENSMUST00000181802 2489 ntBASIC10.72□□□□□ -0.69
Smim1P0C8K7 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smim1P0C8K7 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC10.71□□□□□ -0.69
Smim1P0C8K7 AC148324.1-201ENSMUST00000219034 4240 ntBASIC10.71□□□□□ -0.69
Smim1P0C8K7 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC10.71□□□□□ -0.69
Smim1P0C8K7 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smim1P0C8K7 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC10.71□□□□□ -0.69
Smim1P0C8K7 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smim1P0C8K7 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smim1P0C8K7 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smim1P0C8K7 Gm5049-201ENSMUST00000195878 1590 ntBASIC10.71□□□□□ -0.69
Smim1P0C8K7 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Smim1P0C8K7 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smim1P0C8K7 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smim1P0C8K7 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Smim1P0C8K7 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smim1P0C8K7 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smim1P0C8K7 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smim1P0C8K7 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smim1P0C8K7 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smim1P0C8K7 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smim1P0C8K7 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smim1P0C8K7 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smim1P0C8K7 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Smim1P0C8K7 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC10.71□□□□□ -0.7
Smim1P0C8K7 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Smim1P0C8K7 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Smim1P0C8K7 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Smim1P0C8K7 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Smim1P0C8K7 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Smim1P0C8K7 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Smim1P0C8K7 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smim1P0C8K7 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smim1P0C8K7 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smim1P0C8K7 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Smim1P0C8K7 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smim1P0C8K7 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Smim1P0C8K7 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Smim1P0C8K7 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smim1P0C8K7 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smim1P0C8K7 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Smim1P0C8K7 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Smim1P0C8K7 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Smim1P0C8K7 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Smim1P0C8K7 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Smim1P0C8K7 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms