Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Col4a1P02463 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col4a1P02463 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col4a1P02463 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Col4a1P02463 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col4a1P02463 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Col4a1P02463 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Col4a1P02463 Gm28630-201ENSMUST00000187806 498 ntBASIC18.91■□□□□ 0.62
Col4a1P02463 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC18.91■□□□□ 0.62
Col4a1P02463 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col4a1P02463 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col4a1P02463 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Col4a1P02463 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Col4a1P02463 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col4a1P02463 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col4a1P02463 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Col4a1P02463 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
Col4a1P02463 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC18.9■□□□□ 0.62
Col4a1P02463 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Col4a1P02463 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col4a1P02463 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col4a1P02463 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Col4a1P02463 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Col4a1P02463 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC18.9■□□□□ 0.62
Col4a1P02463 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col4a1P02463 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col4a1P02463 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col4a1P02463 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Col4a1P02463 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col4a1P02463 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col4a1P02463 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col4a1P02463 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Col4a1P02463 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col4a1P02463 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col4a1P02463 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Col4a1P02463 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC18.89■□□□□ 0.61
Col4a1P02463 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col4a1P02463 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col4a1P02463 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Col4a1P02463 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Col4a1P02463 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col4a1P02463 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.61
Col4a1P02463 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC18.89■□□□□ 0.61
Col4a1P02463 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Col4a1P02463 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Col4a1P02463 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Col4a1P02463 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col4a1P02463 AC125206.2-201ENSMUST00000217454 574 ntBASIC18.89■□□□□ 0.61
Col4a1P02463 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Col4a1P02463 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Col4a1P02463 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col4a1P02463 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Col4a1P02463 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col4a1P02463 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC18.88■□□□□ 0.61
Col4a1P02463 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col4a1P02463 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Col4a1P02463 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col4a1P02463 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.88■□□□□ 0.61
Col4a1P02463 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC18.88■□□□□ 0.61
Col4a1P02463 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Col4a1P02463 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col4a1P02463 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col4a1P02463 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Col4a1P02463 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col4a1P02463 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Col4a1P02463 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Col4a1P02463 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col4a1P02463 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col4a1P02463 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC18.87■□□□□ 0.61
Col4a1P02463 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
Col4a1P02463 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Col4a1P02463 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col4a1P02463 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC18.87■□□□□ 0.61
Col4a1P02463 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC18.87■□□□□ 0.61
Col4a1P02463 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col4a1P02463 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col4a1P02463 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC18.87■□□□□ 0.61
Col4a1P02463 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col4a1P02463 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Col4a1P02463 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col4a1P02463 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col4a1P02463 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC18.87■□□□□ 0.61
Col4a1P02463 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col4a1P02463 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col4a1P02463 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col4a1P02463 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Col4a1P02463 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Col4a1P02463 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC18.86■□□□□ 0.61
Col4a1P02463 Gm23547-201ENSMUST00000158210 271 ntBASIC18.86■□□□□ 0.61
Col4a1P02463 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col4a1P02463 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col4a1P02463 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col4a1P02463 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col4a1P02463 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col4a1P02463 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Col4a1P02463 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC18.86■□□□□ 0.61
Col4a1P02463 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.86■□□□□ 0.61
Col4a1P02463 Dancr-204ENSMUST00000132389 2347 ntBASIC18.86■□□□□ 0.61
Col4a1P02463 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col4a1P02463 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms