Protein–RNA interactions for Protein: O89090

Sp1, Transcription factor Sp1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp1O89090 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sp1O89090 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sp1O89090 Gm10499-201ENSMUST00000174094 934 ntBASIC15.65■□□□□ 0.1
Sp1O89090 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.65■□□□□ 0.1
Sp1O89090 Gm17968-201ENSMUST00000194902 784 ntBASIC15.65■□□□□ 0.1
Sp1O89090 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sp1O89090 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Sp1O89090 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sp1O89090 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sp1O89090 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.65■□□□□ 0.1
Sp1O89090 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.65■□□□□ 0.1
Sp1O89090 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sp1O89090 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sp1O89090 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Sp1O89090 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sp1O89090 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sp1O89090 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sp1O89090 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Sp1O89090 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Sp1O89090 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sp1O89090 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.64■□□□□ 0.09
Sp1O89090 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sp1O89090 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.64■□□□□ 0.09
Sp1O89090 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sp1O89090 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sp1O89090 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sp1O89090 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Sp1O89090 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.64■□□□□ 0.09
Sp1O89090 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sp1O89090 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sp1O89090 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sp1O89090 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.64■□□□□ 0.09
Sp1O89090 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sp1O89090 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.64■□□□□ 0.09
Sp1O89090 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.64■□□□□ 0.09
Sp1O89090 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Sp1O89090 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sp1O89090 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sp1O89090 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sp1O89090 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Sp1O89090 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sp1O89090 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sp1O89090 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sp1O89090 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Sp1O89090 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sp1O89090 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sp1O89090 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sp1O89090 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sp1O89090 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.63■□□□□ 0.09
Sp1O89090 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.63■□□□□ 0.09
Sp1O89090 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sp1O89090 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.63■□□□□ 0.09
Sp1O89090 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Sp1O89090 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
Sp1O89090 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.63■□□□□ 0.09
Sp1O89090 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sp1O89090 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sp1O89090 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sp1O89090 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sp1O89090 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sp1O89090 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sp1O89090 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.63■□□□□ 0.09
Sp1O89090 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sp1O89090 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sp1O89090 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sp1O89090 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sp1O89090 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Sp1O89090 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sp1O89090 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.62■□□□□ 0.09
Sp1O89090 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sp1O89090 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sp1O89090 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.62■□□□□ 0.09
Sp1O89090 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sp1O89090 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Sp1O89090 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sp1O89090 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.62■□□□□ 0.09
Sp1O89090 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sp1O89090 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Sp1O89090 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.62■□□□□ 0.09
Sp1O89090 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sp1O89090 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Sp1O89090 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sp1O89090 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sp1O89090 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sp1O89090 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sp1O89090 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sp1O89090 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sp1O89090 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sp1O89090 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Sp1O89090 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sp1O89090 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sp1O89090 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.61■□□□□ 0.09
Sp1O89090 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sp1O89090 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sp1O89090 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sp1O89090 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sp1O89090 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sp1O89090 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Sp1O89090 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sp1O89090 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms