Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 AV026068-213ENSMUST00000223675 1171 ntBASIC14.06□□□□□ -0.16
Abcd4O89016 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Abcd4O89016 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Abcd4O89016 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Abcd4O89016 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.06□□□□□ -0.16
Abcd4O89016 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.06□□□□□ -0.16
Abcd4O89016 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Abcd4O89016 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Abcd4O89016 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Abcd4O89016 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Abcd4O89016 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Abcd4O89016 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Abcd4O89016 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Abcd4O89016 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Abcd4O89016 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Abcd4O89016 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Abcd4O89016 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abcd4O89016 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Abcd4O89016 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abcd4O89016 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abcd4O89016 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abcd4O89016 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abcd4O89016 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abcd4O89016 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Abcd4O89016 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.05□□□□□ -0.16
Abcd4O89016 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.05□□□□□ -0.16
Abcd4O89016 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Abcd4O89016 Gm6089-201ENSMUST00000197666 938 ntBASIC14.05□□□□□ -0.16
Abcd4O89016 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Abcd4O89016 Gm5364-201ENSMUST00000216789 889 ntBASIC14.05□□□□□ -0.16
Abcd4O89016 Gm5867-201ENSMUST00000063197 592 ntBASIC14.05□□□□□ -0.16
Abcd4O89016 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abcd4O89016 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abcd4O89016 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abcd4O89016 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abcd4O89016 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abcd4O89016 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abcd4O89016 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abcd4O89016 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abcd4O89016 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abcd4O89016 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abcd4O89016 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abcd4O89016 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Abcd4O89016 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abcd4O89016 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abcd4O89016 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abcd4O89016 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Abcd4O89016 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.04□□□□□ -0.16
Abcd4O89016 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abcd4O89016 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Abcd4O89016 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Abcd4O89016 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Abcd4O89016 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abcd4O89016 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abcd4O89016 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abcd4O89016 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Abcd4O89016 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abcd4O89016 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abcd4O89016 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.04□□□□□ -0.16
Abcd4O89016 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.04□□□□□ -0.16
Abcd4O89016 Gm2213-201ENSMUST00000197485 688 ntBASIC14.04□□□□□ -0.16
Abcd4O89016 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.04□□□□□ -0.16
Abcd4O89016 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Abcd4O89016 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abcd4O89016 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abcd4O89016 Prob1-201ENSMUST00000097619 3021 ntBASIC14.04□□□□□ -0.16
Abcd4O89016 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abcd4O89016 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abcd4O89016 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abcd4O89016 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abcd4O89016 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Abcd4O89016 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abcd4O89016 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.04□□□□□ -0.16
Abcd4O89016 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abcd4O89016 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abcd4O89016 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abcd4O89016 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abcd4O89016 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abcd4O89016 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abcd4O89016 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abcd4O89016 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abcd4O89016 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Abcd4O89016 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Abcd4O89016 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Abcd4O89016 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Abcd4O89016 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Abcd4O89016 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Abcd4O89016 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Abcd4O89016 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.03□□□□□ -0.16
Abcd4O89016 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Abcd4O89016 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.03□□□□□ -0.16
Abcd4O89016 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Abcd4O89016 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.03□□□□□ -0.16
Abcd4O89016 Gm37935-201ENSMUST00000192012 982 ntBASIC14.03□□□□□ -0.16
Abcd4O89016 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Abcd4O89016 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.03□□□□□ -0.16
Abcd4O89016 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Abcd4O89016 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.03□□□□□ -0.16
Abcd4O89016 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.03□□□□□ -0.16
Abcd4O89016 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms