Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Best1O88870 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.89□□□□□ -0.03
Best1O88870 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Best1O88870 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.89□□□□□ -0.03
Best1O88870 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Best1O88870 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Best1O88870 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Best1O88870 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Best1O88870 Gm12008-201ENSMUST00000117791 755 ntBASIC14.89□□□□□ -0.03
Best1O88870 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Best1O88870 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Best1O88870 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Best1O88870 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Best1O88870 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Best1O88870 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.88□□□□□ -0.03
Best1O88870 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Best1O88870 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Best1O88870 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.88□□□□□ -0.03
Best1O88870 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Best1O88870 Gm25911-201ENSMUST00000157621 56 ntBASIC14.88□□□□□ -0.03
Best1O88870 Gm24513-201ENSMUST00000174964 138 ntBASIC14.88□□□□□ -0.03
Best1O88870 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Best1O88870 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Best1O88870 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Best1O88870 Gm27301-201ENSMUST00000184012 127 ntBASIC14.88□□□□□ -0.03
Best1O88870 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.88□□□□□ -0.03
Best1O88870 Gm2272-201ENSMUST00000194903 582 ntBASIC14.88□□□□□ -0.03
Best1O88870 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Best1O88870 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.88□□□□□ -0.03
Best1O88870 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Best1O88870 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Best1O88870 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Best1O88870 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Best1O88870 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Best1O88870 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Best1O88870 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Best1O88870 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Best1O88870 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Best1O88870 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Best1O88870 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Best1O88870 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Best1O88870 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Best1O88870 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Best1O88870 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Best1O88870 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Best1O88870 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Best1O88870 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Best1O88870 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Best1O88870 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Best1O88870 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Best1O88870 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Best1O88870 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Best1O88870 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Best1O88870 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Best1O88870 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Best1O88870 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Best1O88870 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Best1O88870 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Best1O88870 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.87□□□□□ -0.03
Best1O88870 Gm4995-201ENSMUST00000117247 432 ntBASIC14.87□□□□□ -0.03
Best1O88870 Gm17271-201ENSMUST00000165535 355 ntBASIC14.87□□□□□ -0.03
Best1O88870 Gm6736-201ENSMUST00000166583 948 ntBASIC14.87□□□□□ -0.03
Best1O88870 Gm5177-201ENSMUST00000183092 997 ntBASIC14.87□□□□□ -0.03
Best1O88870 Gm27397-201ENSMUST00000184997 107 ntBASIC14.87□□□□□ -0.03
Best1O88870 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Best1O88870 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Best1O88870 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Best1O88870 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.87□□□□□ -0.03
Best1O88870 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.87□□□□□ -0.03
Best1O88870 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.87□□□□□ -0.03
Best1O88870 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Best1O88870 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Best1O88870 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Best1O88870 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Best1O88870 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Best1O88870 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Best1O88870 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Best1O88870 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.86□□□□□ -0.03
Best1O88870 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Best1O88870 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Best1O88870 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Best1O88870 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Best1O88870 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Best1O88870 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.86□□□□□ -0.03
Best1O88870 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.86□□□□□ -0.03
Best1O88870 Gm17968-201ENSMUST00000194902 784 ntBASIC14.86□□□□□ -0.03
Best1O88870 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Best1O88870 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Best1O88870 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Best1O88870 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.86□□□□□ -0.03
Best1O88870 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Best1O88870 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Best1O88870 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Best1O88870 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Best1O88870 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Best1O88870 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Best1O88870 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Best1O88870 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Best1O88870 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Best1O88870 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms