Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
ClppO88696 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
ClppO88696 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ClppO88696 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
ClppO88696 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
ClppO88696 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ClppO88696 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ClppO88696 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ClppO88696 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ClppO88696 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ClppO88696 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ClppO88696 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ClppO88696 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ClppO88696 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ClppO88696 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ClppO88696 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
ClppO88696 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ClppO88696 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ClppO88696 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ClppO88696 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ClppO88696 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
ClppO88696 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
ClppO88696 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.14■□□□□ 0.01
ClppO88696 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ClppO88696 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ClppO88696 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ClppO88696 Gm8097-201ENSMUST00000117903 829 ntBASIC15.14■□□□□ 0.01
ClppO88696 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.14■□□□□ 0.01
ClppO88696 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ClppO88696 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.14■□□□□ 0.01
ClppO88696 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.14■□□□□ 0.01
ClppO88696 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ClppO88696 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.14■□□□□ 0.01
ClppO88696 Gm6089-201ENSMUST00000197666 938 ntBASIC15.14■□□□□ 0.01
ClppO88696 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.14■□□□□ 0.01
ClppO88696 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ClppO88696 AV026068-213ENSMUST00000223675 1171 ntBASIC15.14■□□□□ 0.01
ClppO88696 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.14■□□□□ 0.01
ClppO88696 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ClppO88696 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ClppO88696 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
ClppO88696 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ClppO88696 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.14■□□□□ 0.01
ClppO88696 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ClppO88696 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
ClppO88696 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ClppO88696 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
ClppO88696 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
ClppO88696 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.13■□□□□ 0.01
ClppO88696 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ClppO88696 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ClppO88696 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ClppO88696 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ClppO88696 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.13■□□□□ 0.01
ClppO88696 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.13■□□□□ 0.01
ClppO88696 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ClppO88696 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.13■□□□□ 0.01
ClppO88696 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
ClppO88696 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.13■□□□□ 0.01
ClppO88696 Gm27525-201ENSMUST00000184465 107 ntBASIC15.13■□□□□ 0.01
ClppO88696 Gm37935-201ENSMUST00000192012 982 ntBASIC15.13■□□□□ 0.01
ClppO88696 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15.13■□□□□ 0.01
ClppO88696 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ClppO88696 AC164107.1-201ENSMUST00000227730 2161 ntBASIC15.13■□□□□ 0.01
ClppO88696 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ClppO88696 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ClppO88696 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
ClppO88696 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
ClppO88696 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ClppO88696 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ClppO88696 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ClppO88696 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ClppO88696 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.13■□□□□ 0.01
ClppO88696 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ClppO88696 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.13■□□□□ 0.01
ClppO88696 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ClppO88696 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ClppO88696 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.12■□□□□ 0.01
ClppO88696 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ClppO88696 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
ClppO88696 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ClppO88696 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ClppO88696 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
ClppO88696 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
ClppO88696 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ClppO88696 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
ClppO88696 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
ClppO88696 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
ClppO88696 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
ClppO88696 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.12■□□□□ 0.01
ClppO88696 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ClppO88696 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ClppO88696 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ClppO88696 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ClppO88696 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ClppO88696 Gm7222-201ENSMUST00000117512 906 ntBASIC15.12■□□□□ 0.01
ClppO88696 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.12■□□□□ 0.01
ClppO88696 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.12■□□□□ 0.01
ClppO88696 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.12■□□□□ 0.01
ClppO88696 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms