Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Lmx1bO88609 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lmx1bO88609 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.07□□□□□ -0.16
Lmx1bO88609 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lmx1bO88609 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lmx1bO88609 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lmx1bO88609 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lmx1bO88609 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lmx1bO88609 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lmx1bO88609 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lmx1bO88609 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lmx1bO88609 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lmx1bO88609 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lmx1bO88609 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.06□□□□□ -0.16
Lmx1bO88609 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lmx1bO88609 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Lmx1bO88609 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lmx1bO88609 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lmx1bO88609 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lmx1bO88609 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lmx1bO88609 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Lmx1bO88609 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lmx1bO88609 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Lmx1bO88609 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lmx1bO88609 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lmx1bO88609 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.06□□□□□ -0.16
Lmx1bO88609 Gm37935-201ENSMUST00000192012 982 ntBASIC14.06□□□□□ -0.16
Lmx1bO88609 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.06□□□□□ -0.16
Lmx1bO88609 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lmx1bO88609 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lmx1bO88609 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lmx1bO88609 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Lmx1bO88609 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lmx1bO88609 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lmx1bO88609 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Lmx1bO88609 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lmx1bO88609 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lmx1bO88609 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lmx1bO88609 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lmx1bO88609 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lmx1bO88609 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lmx1bO88609 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Lmx1bO88609 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lmx1bO88609 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lmx1bO88609 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lmx1bO88609 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lmx1bO88609 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.05□□□□□ -0.16
Lmx1bO88609 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lmx1bO88609 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lmx1bO88609 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lmx1bO88609 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lmx1bO88609 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lmx1bO88609 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lmx1bO88609 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lmx1bO88609 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.05□□□□□ -0.16
Lmx1bO88609 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.05□□□□□ -0.16
Lmx1bO88609 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lmx1bO88609 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lmx1bO88609 Gm5682-201ENSMUST00000173402 505 ntBASIC14.05□□□□□ -0.16
Lmx1bO88609 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lmx1bO88609 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Lmx1bO88609 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lmx1bO88609 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lmx1bO88609 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lmx1bO88609 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lmx1bO88609 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lmx1bO88609 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.05□□□□□ -0.16
Lmx1bO88609 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Lmx1bO88609 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lmx1bO88609 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.05□□□□□ -0.16
Lmx1bO88609 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lmx1bO88609 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lmx1bO88609 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lmx1bO88609 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lmx1bO88609 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lmx1bO88609 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lmx1bO88609 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Lmx1bO88609 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lmx1bO88609 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lmx1bO88609 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Lmx1bO88609 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lmx1bO88609 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lmx1bO88609 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.04□□□□□ -0.16
Lmx1bO88609 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Lmx1bO88609 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lmx1bO88609 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lmx1bO88609 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lmx1bO88609 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lmx1bO88609 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Lmx1bO88609 Gm14140-201ENSMUST00000119999 995 ntBASIC14.04□□□□□ -0.16
Lmx1bO88609 Gm15467-201ENSMUST00000120582 445 ntBASIC14.04□□□□□ -0.16
Lmx1bO88609 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lmx1bO88609 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.04□□□□□ -0.16
Lmx1bO88609 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lmx1bO88609 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lmx1bO88609 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.04□□□□□ -0.16
Lmx1bO88609 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lmx1bO88609 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lmx1bO88609 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lmx1bO88609 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms