Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn1O88551 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn1O88551 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn1O88551 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn1O88551 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn1O88551 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn1O88551 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn1O88551 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Cldn1O88551 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cldn1O88551 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn1O88551 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn1O88551 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.3□□□□□ -0.28
Cldn1O88551 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.3□□□□□ -0.28
Cldn1O88551 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn1O88551 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn1O88551 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Cldn1O88551 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn1O88551 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn1O88551 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn1O88551 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cldn1O88551 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn1O88551 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn1O88551 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn1O88551 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Cldn1O88551 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn1O88551 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cldn1O88551 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Cldn1O88551 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cldn1O88551 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Cldn1O88551 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cldn1O88551 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Cldn1O88551 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cldn1O88551 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cldn1O88551 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cldn1O88551 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.29□□□□□ -0.28
Cldn1O88551 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cldn1O88551 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cldn1O88551 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cldn1O88551 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.29□□□□□ -0.28
Cldn1O88551 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Cldn1O88551 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cldn1O88551 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Cldn1O88551 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.29□□□□□ -0.28
Cldn1O88551 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.29□□□□□ -0.28
Cldn1O88551 Gm17968-201ENSMUST00000194902 784 ntBASIC13.29□□□□□ -0.28
Cldn1O88551 Gm43438-201ENSMUST00000198133 379 ntBASIC13.29□□□□□ -0.28
Cldn1O88551 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.29□□□□□ -0.28
Cldn1O88551 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cldn1O88551 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cldn1O88551 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cldn1O88551 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cldn1O88551 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
Cldn1O88551 Gm11620-201ENSMUST00000118770 1845 ntBASIC13.29□□□□□ -0.28
Cldn1O88551 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cldn1O88551 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cldn1O88551 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cldn1O88551 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cldn1O88551 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cldn1O88551 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cldn1O88551 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cldn1O88551 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cldn1O88551 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cldn1O88551 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cldn1O88551 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.28□□□□□ -0.28
Cldn1O88551 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Cldn1O88551 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cldn1O88551 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cldn1O88551 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cldn1O88551 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cldn1O88551 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cldn1O88551 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cldn1O88551 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.28□□□□□ -0.28
Cldn1O88551 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Cldn1O88551 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.28□□□□□ -0.28
Cldn1O88551 Gm27494-201ENSMUST00000184735 189 ntBASIC13.28□□□□□ -0.28
Cldn1O88551 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cldn1O88551 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.28□□□□□ -0.28
Cldn1O88551 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cldn1O88551 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cldn1O88551 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cldn1O88551 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cldn1O88551 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cldn1O88551 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
Cldn1O88551 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cldn1O88551 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cldn1O88551 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cldn1O88551 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cldn1O88551 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cldn1O88551 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cldn1O88551 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cldn1O88551 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cldn1O88551 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Cldn1O88551 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cldn1O88551 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Cldn1O88551 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cldn1O88551 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cldn1O88551 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Cldn1O88551 Mir1895-201ENSMUST00000122615 79 ntBASIC13.27□□□□□ -0.29
Cldn1O88551 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cldn1O88551 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms