Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cops4O88544 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cops4O88544 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cops4O88544 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Cops4O88544 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Cops4O88544 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops4O88544 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cops4O88544 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops4O88544 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.37□□□□□ -0.11
Cops4O88544 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops4O88544 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops4O88544 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops4O88544 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops4O88544 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops4O88544 Gm13559-201ENSMUST00000120476 863 ntBASIC14.37□□□□□ -0.11
Cops4O88544 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.37□□□□□ -0.11
Cops4O88544 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.37□□□□□ -0.11
Cops4O88544 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cops4O88544 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops4O88544 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cops4O88544 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops4O88544 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Cops4O88544 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Cops4O88544 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Cops4O88544 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Cops4O88544 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cops4O88544 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops4O88544 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops4O88544 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops4O88544 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cops4O88544 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops4O88544 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops4O88544 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops4O88544 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops4O88544 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops4O88544 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops4O88544 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cops4O88544 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cops4O88544 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cops4O88544 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cops4O88544 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cops4O88544 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cops4O88544 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cops4O88544 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.36□□□□□ -0.11
Cops4O88544 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cops4O88544 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cops4O88544 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cops4O88544 Mir5130-201ENSMUST00000175160 84 ntBASIC14.36□□□□□ -0.11
Cops4O88544 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cops4O88544 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.36□□□□□ -0.11
Cops4O88544 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cops4O88544 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cops4O88544 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cops4O88544 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.36□□□□□ -0.11
Cops4O88544 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cops4O88544 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cops4O88544 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cops4O88544 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cops4O88544 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Cops4O88544 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cops4O88544 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.36□□□□□ -0.11
Cops4O88544 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cops4O88544 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cops4O88544 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cops4O88544 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cops4O88544 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cops4O88544 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cops4O88544 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cops4O88544 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.36□□□□□ -0.11
Cops4O88544 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cops4O88544 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops4O88544 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cops4O88544 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.35□□□□□ -0.11
Cops4O88544 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Cops4O88544 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cops4O88544 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cops4O88544 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops4O88544 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.35□□□□□ -0.11
Cops4O88544 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Cops4O88544 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.35□□□□□ -0.11
Cops4O88544 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.35□□□□□ -0.11
Cops4O88544 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops4O88544 Gm7889-201ENSMUST00000185591 958 ntBASIC14.35□□□□□ -0.11
Cops4O88544 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.35□□□□□ -0.11
Cops4O88544 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops4O88544 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cops4O88544 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Cops4O88544 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops4O88544 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cops4O88544 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.35□□□□□ -0.11
Cops4O88544 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops4O88544 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cops4O88544 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops4O88544 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cops4O88544 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.35□□□□□ -0.11
Cops4O88544 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cops4O88544 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops4O88544 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops4O88544 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cops4O88544 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms