Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Capns1O88456 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Capns1O88456 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.38□□□□□ -0.11
Capns1O88456 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Capns1O88456 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Capns1O88456 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Capns1O88456 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Capns1O88456 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Capns1O88456 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Capns1O88456 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Capns1O88456 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Capns1O88456 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Capns1O88456 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Capns1O88456 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.38□□□□□ -0.11
Capns1O88456 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.38□□□□□ -0.11
Capns1O88456 Gm17808-201ENSMUST00000200859 894 ntBASIC14.38□□□□□ -0.11
Capns1O88456 Gm7370-201ENSMUST00000219471 767 ntBASIC14.38□□□□□ -0.11
Capns1O88456 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Capns1O88456 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Capns1O88456 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Capns1O88456 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Capns1O88456 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Capns1O88456 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Capns1O88456 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Capns1O88456 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Capns1O88456 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Capns1O88456 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Capns1O88456 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Capns1O88456 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Capns1O88456 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Capns1O88456 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Capns1O88456 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Capns1O88456 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Capns1O88456 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Capns1O88456 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Capns1O88456 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Capns1O88456 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.37□□□□□ -0.11
Capns1O88456 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Capns1O88456 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Capns1O88456 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Capns1O88456 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Capns1O88456 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Capns1O88456 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.37□□□□□ -0.11
Capns1O88456 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Capns1O88456 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Capns1O88456 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Capns1O88456 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Capns1O88456 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Capns1O88456 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Capns1O88456 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Capns1O88456 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Capns1O88456 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.37□□□□□ -0.11
Capns1O88456 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Capns1O88456 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Capns1O88456 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Capns1O88456 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Capns1O88456 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Capns1O88456 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Capns1O88456 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.37□□□□□ -0.11
Capns1O88456 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Capns1O88456 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Capns1O88456 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Capns1O88456 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Capns1O88456 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Capns1O88456 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Capns1O88456 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Capns1O88456 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Capns1O88456 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Capns1O88456 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Capns1O88456 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Capns1O88456 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Capns1O88456 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Capns1O88456 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Capns1O88456 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Capns1O88456 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Capns1O88456 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Capns1O88456 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Capns1O88456 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.36□□□□□ -0.11
Capns1O88456 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.36□□□□□ -0.11
Capns1O88456 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.36□□□□□ -0.11
Capns1O88456 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.36□□□□□ -0.11
Capns1O88456 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.36□□□□□ -0.11
Capns1O88456 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.36□□□□□ -0.11
Capns1O88456 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Capns1O88456 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Capns1O88456 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Capns1O88456 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Capns1O88456 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Capns1O88456 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Capns1O88456 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
Capns1O88456 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.36□□□□□ -0.11
Capns1O88456 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Capns1O88456 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Capns1O88456 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.36□□□□□ -0.11
Capns1O88456 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Capns1O88456 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Capns1O88456 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.36□□□□□ -0.11
Capns1O88456 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Capns1O88456 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Capns1O88456 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms