Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1hO88427 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1hO88427 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1hO88427 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1hO88427 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cacna1hO88427 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Cacna1hO88427 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1hO88427 Gm8062-201ENSMUST00000139696 444 ntBASIC15.01□□□□□ -0.01
Cacna1hO88427 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC15.01□□□□□ -0.01
Cacna1hO88427 Gm27892-201ENSMUST00000185017 106 ntBASIC15.01□□□□□ -0.01
Cacna1hO88427 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1hO88427 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1hO88427 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1hO88427 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1hO88427 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1hO88427 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1hO88427 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1hO88427 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1hO88427 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Cacna1hO88427 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1hO88427 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1hO88427 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1hO88427 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cacna1hO88427 Gm13226-201ENSMUST00000117838 404 ntBASIC15□□□□□ -0.01
Cacna1hO88427 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cacna1hO88427 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cacna1hO88427 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1hO88427 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Cacna1hO88427 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1hO88427 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC15□□□□□ -0.01
Cacna1hO88427 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Cacna1hO88427 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1hO88427 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1hO88427 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1hO88427 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC15□□□□□ -0.01
Cacna1hO88427 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1hO88427 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cacna1hO88427 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1hO88427 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1hO88427 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1hO88427 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Cacna1hO88427 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Cacna1hO88427 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1hO88427 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1hO88427 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.99□□□□□ -0.01
Cacna1hO88427 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC14.99□□□□□ -0.01
Cacna1hO88427 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1hO88427 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1hO88427 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.99□□□□□ -0.01
Cacna1hO88427 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Cacna1hO88427 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1hO88427 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1hO88427 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1hO88427 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1hO88427 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1hO88427 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1hO88427 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Cacna1hO88427 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1hO88427 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1hO88427 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Cacna1hO88427 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1hO88427 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1hO88427 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1hO88427 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1hO88427 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1hO88427 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.99□□□□□ -0.01
Cacna1hO88427 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1hO88427 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1hO88427 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.99□□□□□ -0.01
Cacna1hO88427 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1hO88427 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.99□□□□□ -0.01
Cacna1hO88427 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1hO88427 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1hO88427 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.99□□□□□ -0.01
Cacna1hO88427 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1hO88427 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1hO88427 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1hO88427 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1hO88427 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1hO88427 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1hO88427 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1hO88427 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.98□□□□□ -0.01
Cacna1hO88427 Gm27920-201ENSMUST00000183953 96 ntBASIC14.98□□□□□ -0.01
Cacna1hO88427 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.98□□□□□ -0.01
Cacna1hO88427 Gm15823-201ENSMUST00000064305 670 ntBASIC14.98□□□□□ -0.01
Cacna1hO88427 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Cacna1hO88427 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Cacna1hO88427 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1hO88427 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1hO88427 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.98□□□□□ -0.01
Cacna1hO88427 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1hO88427 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1hO88427 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Cacna1hO88427 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1hO88427 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.98□□□□□ -0.01
Cacna1hO88427 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Cacna1hO88427 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1hO88427 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.98□□□□□ -0.01
Cacna1hO88427 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1hO88427 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms