Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tgfbr3O88393 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tgfbr3O88393 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Tgfbr3O88393 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tgfbr3O88393 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tgfbr3O88393 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tgfbr3O88393 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tgfbr3O88393 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.71□□□□□ -0.05
Tgfbr3O88393 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tgfbr3O88393 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.71□□□□□ -0.05
Tgfbr3O88393 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.71□□□□□ -0.05
Tgfbr3O88393 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tgfbr3O88393 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tgfbr3O88393 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tgfbr3O88393 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Tgfbr3O88393 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Tgfbr3O88393 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tgfbr3O88393 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tgfbr3O88393 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tgfbr3O88393 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
Tgfbr3O88393 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Tgfbr3O88393 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tgfbr3O88393 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Tgfbr3O88393 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Tgfbr3O88393 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.71□□□□□ -0.06
Tgfbr3O88393 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Tgfbr3O88393 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Tgfbr3O88393 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Tgfbr3O88393 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tgfbr3O88393 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.7□□□□□ -0.06
Tgfbr3O88393 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tgfbr3O88393 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.7□□□□□ -0.06
Tgfbr3O88393 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Tgfbr3O88393 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tgfbr3O88393 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tgfbr3O88393 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.7□□□□□ -0.06
Tgfbr3O88393 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tgfbr3O88393 Gm16198-201ENSMUST00000118766 670 ntBASIC14.7□□□□□ -0.06
Tgfbr3O88393 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Tgfbr3O88393 Gm8318-201ENSMUST00000182954 872 ntBASIC14.7□□□□□ -0.06
Tgfbr3O88393 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tgfbr3O88393 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Tgfbr3O88393 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tgfbr3O88393 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Tgfbr3O88393 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tgfbr3O88393 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tgfbr3O88393 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.7□□□□□ -0.06
Tgfbr3O88393 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Tgfbr3O88393 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
Tgfbr3O88393 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Tgfbr3O88393 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Tgfbr3O88393 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Tgfbr3O88393 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tgfbr3O88393 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tgfbr3O88393 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tgfbr3O88393 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Tgfbr3O88393 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tgfbr3O88393 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tgfbr3O88393 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.69□□□□□ -0.06
Tgfbr3O88393 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Tgfbr3O88393 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tgfbr3O88393 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Tgfbr3O88393 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tgfbr3O88393 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tgfbr3O88393 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Tgfbr3O88393 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Tgfbr3O88393 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tgfbr3O88393 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tgfbr3O88393 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tgfbr3O88393 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Tgfbr3O88393 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Tgfbr3O88393 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.69□□□□□ -0.06
Tgfbr3O88393 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Tgfbr3O88393 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Tgfbr3O88393 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Tgfbr3O88393 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tgfbr3O88393 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Tgfbr3O88393 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.69□□□□□ -0.06
Tgfbr3O88393 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tgfbr3O88393 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tgfbr3O88393 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tgfbr3O88393 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tgfbr3O88393 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tgfbr3O88393 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Tgfbr3O88393 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tgfbr3O88393 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.69□□□□□ -0.06
Tgfbr3O88393 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.69□□□□□ -0.06
Tgfbr3O88393 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tgfbr3O88393 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Tgfbr3O88393 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
Tgfbr3O88393 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tgfbr3O88393 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Tgfbr3O88393 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Tgfbr3O88393 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tgfbr3O88393 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tgfbr3O88393 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tgfbr3O88393 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tgfbr3O88393 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Tgfbr3O88393 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tgfbr3O88393 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms