Protein–RNA interactions for Protein: O88351

Ikbkb, Inhibitor of nuclear factor kappa-B kinase subunit beta, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IkbkbO88351 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.16■□□□□ 0.34
IkbkbO88351 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
IkbkbO88351 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.16■□□□□ 0.34
IkbkbO88351 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
IkbkbO88351 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.16■□□□□ 0.34
IkbkbO88351 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
IkbkbO88351 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IkbkbO88351 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IkbkbO88351 Gm27528-202ENSMUST00000222916 2012 ntBASIC17.16■□□□□ 0.34
IkbkbO88351 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IkbkbO88351 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
IkbkbO88351 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
IkbkbO88351 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IkbkbO88351 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
IkbkbO88351 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.16■□□□□ 0.34
IkbkbO88351 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.16■□□□□ 0.34
IkbkbO88351 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.16■□□□□ 0.34
IkbkbO88351 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IkbkbO88351 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IkbkbO88351 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
IkbkbO88351 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
IkbkbO88351 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IkbkbO88351 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IkbkbO88351 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IkbkbO88351 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IkbkbO88351 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
IkbkbO88351 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
IkbkbO88351 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
IkbkbO88351 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.15■□□□□ 0.34
IkbkbO88351 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IkbkbO88351 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IkbkbO88351 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.15■□□□□ 0.34
IkbkbO88351 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.15■□□□□ 0.34
IkbkbO88351 Gm18733-201ENSMUST00000173950 856 ntBASIC17.15■□□□□ 0.34
IkbkbO88351 Gm4535-201ENSMUST00000182274 558 ntBASIC17.15■□□□□ 0.34
IkbkbO88351 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.15■□□□□ 0.34
IkbkbO88351 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.15■□□□□ 0.34
IkbkbO88351 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IkbkbO88351 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IkbkbO88351 Gm10355-201ENSMUST00000097146 517 ntBASIC17.15■□□□□ 0.34
IkbkbO88351 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IkbkbO88351 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
IkbkbO88351 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
IkbkbO88351 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
IkbkbO88351 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
IkbkbO88351 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IkbkbO88351 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
IkbkbO88351 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
IkbkbO88351 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
IkbkbO88351 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IkbkbO88351 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
IkbkbO88351 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IkbkbO88351 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IkbkbO88351 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC17.14■□□□□ 0.33
IkbkbO88351 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
IkbkbO88351 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IkbkbO88351 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IkbkbO88351 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IkbkbO88351 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
IkbkbO88351 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IkbkbO88351 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IkbkbO88351 Gm8097-201ENSMUST00000117903 829 ntBASIC17.14■□□□□ 0.33
IkbkbO88351 Gm13418-201ENSMUST00000119097 944 ntBASIC17.14■□□□□ 0.33
IkbkbO88351 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
IkbkbO88351 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
IkbkbO88351 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IkbkbO88351 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
IkbkbO88351 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
IkbkbO88351 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IkbkbO88351 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
IkbkbO88351 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.14■□□□□ 0.33
IkbkbO88351 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
IkbkbO88351 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IkbkbO88351 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
IkbkbO88351 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.13■□□□□ 0.33
IkbkbO88351 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
IkbkbO88351 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IkbkbO88351 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
IkbkbO88351 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IkbkbO88351 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IkbkbO88351 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IkbkbO88351 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IkbkbO88351 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IkbkbO88351 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
IkbkbO88351 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.13■□□□□ 0.33
IkbkbO88351 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IkbkbO88351 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
IkbkbO88351 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
IkbkbO88351 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IkbkbO88351 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
IkbkbO88351 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
IkbkbO88351 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
IkbkbO88351 Gm8655-201ENSMUST00000221159 852 ntBASIC17.13■□□□□ 0.33
IkbkbO88351 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IkbkbO88351 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IkbkbO88351 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
IkbkbO88351 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
IkbkbO88351 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
IkbkbO88351 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IkbkbO88351 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms