Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc4a4O88343 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc4a4O88343 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc4a4O88343 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc4a4O88343 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc4a4O88343 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Slc4a4O88343 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc4a4O88343 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc4a4O88343 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Slc4a4O88343 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Slc4a4O88343 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Slc4a4O88343 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Slc4a4O88343 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Slc4a4O88343 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.29■□□□□ 0.52
Slc4a4O88343 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Slc4a4O88343 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc4a4O88343 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc4a4O88343 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Slc4a4O88343 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC18.29■□□□□ 0.52
Slc4a4O88343 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
Slc4a4O88343 Gm9727-201ENSMUST00000161387 555 ntBASIC18.29■□□□□ 0.52
Slc4a4O88343 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc4a4O88343 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC18.29■□□□□ 0.52
Slc4a4O88343 Gm27300-201ENSMUST00000184085 97 ntBASIC18.29■□□□□ 0.52
Slc4a4O88343 Gm27335-201ENSMUST00000184758 97 ntBASIC18.29■□□□□ 0.52
Slc4a4O88343 Gm8000-201ENSMUST00000188378 592 ntBASIC18.29■□□□□ 0.52
Slc4a4O88343 Gm43332-201ENSMUST00000202511 1044 ntBASIC18.29■□□□□ 0.52
Slc4a4O88343 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC18.29■□□□□ 0.52
Slc4a4O88343 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc4a4O88343 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc4a4O88343 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc4a4O88343 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.29■□□□□ 0.52
Slc4a4O88343 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.29■□□□□ 0.52
Slc4a4O88343 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc4a4O88343 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc4a4O88343 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc4a4O88343 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc4a4O88343 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc4a4O88343 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc4a4O88343 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc4a4O88343 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc4a4O88343 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.28■□□□□ 0.52
Slc4a4O88343 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC18.28■□□□□ 0.52
Slc4a4O88343 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.28■□□□□ 0.52
Slc4a4O88343 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Slc4a4O88343 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Slc4a4O88343 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC18.28■□□□□ 0.52
Slc4a4O88343 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc4a4O88343 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Slc4a4O88343 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc4a4O88343 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc4a4O88343 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc4a4O88343 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc4a4O88343 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.28■□□□□ 0.52
Slc4a4O88343 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC18.28■□□□□ 0.52
Slc4a4O88343 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc4a4O88343 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Slc4a4O88343 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc4a4O88343 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc4a4O88343 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc4a4O88343 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Slc4a4O88343 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.27■□□□□ 0.52
Slc4a4O88343 Gm38318-201ENSMUST00000195769 1706 ntBASIC18.27■□□□□ 0.52
Slc4a4O88343 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc4a4O88343 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc4a4O88343 Gm15467-201ENSMUST00000120582 445 ntBASIC18.27■□□□□ 0.52
Slc4a4O88343 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC18.27■□□□□ 0.52
Slc4a4O88343 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC18.27■□□□□ 0.52
Slc4a4O88343 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc4a4O88343 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Slc4a4O88343 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC18.27■□□□□ 0.52
Slc4a4O88343 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Slc4a4O88343 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Slc4a4O88343 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc4a4O88343 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Slc4a4O88343 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.27■□□□□ 0.52
Slc4a4O88343 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc4a4O88343 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Slc4a4O88343 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.27■□□□□ 0.52
Slc4a4O88343 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Slc4a4O88343 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Slc4a4O88343 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Slc4a4O88343 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Slc4a4O88343 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.26■□□□□ 0.51
Slc4a4O88343 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Slc4a4O88343 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc4a4O88343 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc4a4O88343 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc4a4O88343 Gm8318-201ENSMUST00000182954 872 ntBASIC18.26■□□□□ 0.51
Slc4a4O88343 Gm5264-201ENSMUST00000190584 848 ntBASIC18.26■□□□□ 0.51
Slc4a4O88343 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc4a4O88343 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Slc4a4O88343 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc4a4O88343 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc4a4O88343 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc4a4O88343 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc4a4O88343 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc4a4O88343 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc4a4O88343 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc4a4O88343 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms