Protein–RNA interactions for Protein: O70491

Stra6, Receptor for retinol uptake STRA6, mousemouse

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra6O70491 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stra6O70491 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stra6O70491 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stra6O70491 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Stra6O70491 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stra6O70491 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stra6O70491 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stra6O70491 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stra6O70491 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stra6O70491 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stra6O70491 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Stra6O70491 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.1■□□□□ 0.33
Stra6O70491 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stra6O70491 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stra6O70491 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.1■□□□□ 0.33
Stra6O70491 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stra6O70491 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stra6O70491 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.1■□□□□ 0.33
Stra6O70491 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Stra6O70491 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.1■□□□□ 0.33
Stra6O70491 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Stra6O70491 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Stra6O70491 Mir1895-201ENSMUST00000122615 79 ntBASIC17.1■□□□□ 0.33
Stra6O70491 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.1■□□□□ 0.33
Stra6O70491 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC17.1■□□□□ 0.33
Stra6O70491 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC17.1■□□□□ 0.33
Stra6O70491 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.1■□□□□ 0.33
Stra6O70491 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Stra6O70491 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Stra6O70491 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stra6O70491 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stra6O70491 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Stra6O70491 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC17.1■□□□□ 0.33
Stra6O70491 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Stra6O70491 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stra6O70491 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stra6O70491 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Stra6O70491 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
Stra6O70491 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.1■□□□□ 0.33
Stra6O70491 Gm13332-201ENSMUST00000120451 1398 ntBASIC17.1■□□□□ 0.33
Stra6O70491 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Stra6O70491 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stra6O70491 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stra6O70491 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stra6O70491 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stra6O70491 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Stra6O70491 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Stra6O70491 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Stra6O70491 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Stra6O70491 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Stra6O70491 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stra6O70491 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stra6O70491 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stra6O70491 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stra6O70491 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Stra6O70491 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Stra6O70491 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stra6O70491 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Stra6O70491 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Stra6O70491 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.09■□□□□ 0.33
Stra6O70491 Auts2-212ENSMUST00000178555 309 ntBASIC17.09■□□□□ 0.33
Stra6O70491 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC17.09■□□□□ 0.33
Stra6O70491 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Stra6O70491 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stra6O70491 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stra6O70491 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stra6O70491 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Stra6O70491 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stra6O70491 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Stra6O70491 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stra6O70491 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Stra6O70491 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Stra6O70491 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.09■□□□□ 0.33
Stra6O70491 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stra6O70491 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stra6O70491 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Stra6O70491 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Stra6O70491 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Stra6O70491 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Stra6O70491 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Stra6O70491 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
Stra6O70491 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Stra6O70491 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Stra6O70491 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.08■□□□□ 0.33
Stra6O70491 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
Stra6O70491 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.08■□□□□ 0.32
Stra6O70491 Gm12008-201ENSMUST00000117791 755 ntBASIC17.08■□□□□ 0.32
Stra6O70491 Gm16198-201ENSMUST00000118766 670 ntBASIC17.08■□□□□ 0.32
Stra6O70491 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC17.08■□□□□ 0.32
Stra6O70491 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC17.08■□□□□ 0.32
Stra6O70491 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC17.08■□□□□ 0.32
Stra6O70491 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Stra6O70491 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Stra6O70491 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Stra6O70491 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Stra6O70491 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Stra6O70491 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.08■□□□□ 0.32
Stra6O70491 Nrn1-204ENSMUST00000224323 1779 ntBASIC17.07■□□□□ 0.32
Stra6O70491 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Stra6O70491 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms