Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ubr1O70481 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC19.94■□□□□ 0.78
Ubr1O70481 CT025535.1-201ENSMUST00000227172 491 ntBASIC19.94■□□□□ 0.78
Ubr1O70481 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ubr1O70481 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ubr1O70481 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ubr1O70481 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC19.94■□□□□ 0.78
Ubr1O70481 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ubr1O70481 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Ubr1O70481 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Ubr1O70481 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ubr1O70481 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ubr1O70481 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ubr1O70481 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ubr1O70481 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ubr1O70481 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ubr1O70481 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ubr1O70481 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ubr1O70481 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
Ubr1O70481 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ubr1O70481 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ubr1O70481 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC19.93■□□□□ 0.78
Ubr1O70481 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC19.93■□□□□ 0.78
Ubr1O70481 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ubr1O70481 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Ubr1O70481 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ubr1O70481 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC19.93■□□□□ 0.78
Ubr1O70481 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ubr1O70481 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ubr1O70481 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Ubr1O70481 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ubr1O70481 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ubr1O70481 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC19.93■□□□□ 0.78
Ubr1O70481 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Ubr1O70481 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
Ubr1O70481 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
Ubr1O70481 Gm9824-201ENSMUST00000178707 561 ntBASIC19.93■□□□□ 0.78
Ubr1O70481 Gm8116-201ENSMUST00000182917 1201 ntBASIC19.93■□□□□ 0.78
Ubr1O70481 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC19.93■□□□□ 0.78
Ubr1O70481 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ubr1O70481 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Ubr1O70481 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ubr1O70481 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC19.92■□□□□ 0.78
Ubr1O70481 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ubr1O70481 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ubr1O70481 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ubr1O70481 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Ubr1O70481 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ubr1O70481 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ubr1O70481 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ubr1O70481 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Ubr1O70481 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ubr1O70481 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ubr1O70481 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC19.92■□□□□ 0.78
Ubr1O70481 AC125206.2-201ENSMUST00000217454 574 ntBASIC19.92■□□□□ 0.78
Ubr1O70481 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Ubr1O70481 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Ubr1O70481 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC19.92■□□□□ 0.78
Ubr1O70481 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ubr1O70481 AC069562.2-201ENSMUST00000224644 2146 ntBASIC19.92■□□□□ 0.78
Ubr1O70481 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ubr1O70481 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ubr1O70481 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ubr1O70481 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ubr1O70481 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ubr1O70481 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ubr1O70481 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ubr1O70481 Ighv8-7-201ENSMUST00000194349 297 ntBASIC19.91■□□□□ 0.78
Ubr1O70481 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Ubr1O70481 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ubr1O70481 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ubr1O70481 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ubr1O70481 AC159621.2-201ENSMUST00000223519 1326 ntBASIC19.91■□□□□ 0.78
Ubr1O70481 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ubr1O70481 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Ubr1O70481 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Ubr1O70481 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ubr1O70481 Gm2423-201ENSMUST00000074863 733 ntBASIC19.9■□□□□ 0.78
Ubr1O70481 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ubr1O70481 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC19.9■□□□□ 0.78
Ubr1O70481 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Ubr1O70481 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ubr1O70481 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ubr1O70481 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC19.9■□□□□ 0.78
Ubr1O70481 Gm4691-201ENSMUST00000182339 1000 ntBASIC19.9■□□□□ 0.78
Ubr1O70481 Gm2451-201ENSMUST00000199447 999 ntBASIC19.9■□□□□ 0.78
Ubr1O70481 Gm10290-201ENSMUST00000200451 999 ntBASIC19.9■□□□□ 0.78
Ubr1O70481 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ubr1O70481 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Ubr1O70481 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ubr1O70481 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ubr1O70481 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Ubr1O70481 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Ubr1O70481 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Ubr1O70481 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ubr1O70481 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ubr1O70481 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ubr1O70481 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ubr1O70481 Mir7684-201ENSMUST00000183858 60 ntBASIC19.89■□□□□ 0.77
Ubr1O70481 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms