Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pdlim1O70400 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdlim1O70400 App-207ENSMUST00000227737 2827 ntBASIC15.32■□□□□ 0.04
Pdlim1O70400 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdlim1O70400 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pdlim1O70400 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdlim1O70400 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Pdlim1O70400 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim1O70400 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim1O70400 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim1O70400 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim1O70400 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim1O70400 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim1O70400 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC15.31■□□□□ 0.04
Pdlim1O70400 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim1O70400 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.31■□□□□ 0.04
Pdlim1O70400 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.31■□□□□ 0.04
Pdlim1O70400 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim1O70400 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.31■□□□□ 0.04
Pdlim1O70400 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Pdlim1O70400 Gm5682-201ENSMUST00000173402 505 ntBASIC15.31■□□□□ 0.04
Pdlim1O70400 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Pdlim1O70400 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.31■□□□□ 0.04
Pdlim1O70400 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim1O70400 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim1O70400 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim1O70400 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim1O70400 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim1O70400 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Pdlim1O70400 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim1O70400 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.31■□□□□ 0.04
Pdlim1O70400 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Pdlim1O70400 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim1O70400 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim1O70400 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim1O70400 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim1O70400 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim1O70400 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim1O70400 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim1O70400 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pdlim1O70400 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Pdlim1O70400 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.3■□□□□ 0.04
Pdlim1O70400 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pdlim1O70400 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pdlim1O70400 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pdlim1O70400 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.3■□□□□ 0.04
Pdlim1O70400 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pdlim1O70400 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pdlim1O70400 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Pdlim1O70400 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15.3■□□□□ 0.04
Pdlim1O70400 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pdlim1O70400 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.3■□□□□ 0.04
Pdlim1O70400 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.3■□□□□ 0.04
Pdlim1O70400 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.3■□□□□ 0.04
Pdlim1O70400 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pdlim1O70400 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pdlim1O70400 Gm7461-201ENSMUST00000058918 827 ntBASIC15.3■□□□□ 0.04
Pdlim1O70400 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pdlim1O70400 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pdlim1O70400 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pdlim1O70400 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pdlim1O70400 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim1O70400 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim1O70400 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Pdlim1O70400 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Pdlim1O70400 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.29■□□□□ 0.04
Pdlim1O70400 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.29■□□□□ 0.04
Pdlim1O70400 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim1O70400 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim1O70400 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim1O70400 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim1O70400 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim1O70400 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.29■□□□□ 0.04
Pdlim1O70400 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim1O70400 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim1O70400 Gm18733-201ENSMUST00000173950 856 ntBASIC15.29■□□□□ 0.04
Pdlim1O70400 Mir5126-201ENSMUST00000175513 77 ntBASIC15.29■□□□□ 0.04
Pdlim1O70400 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim1O70400 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim1O70400 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim1O70400 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim1O70400 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim1O70400 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim1O70400 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim1O70400 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim1O70400 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim1O70400 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim1O70400 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Pdlim1O70400 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim1O70400 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim1O70400 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim1O70400 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Pdlim1O70400 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdlim1O70400 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdlim1O70400 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Pdlim1O70400 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdlim1O70400 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdlim1O70400 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdlim1O70400 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdlim1O70400 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms