Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.7□□□□□ -0.06
Rdh5O55240 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Rdh5O55240 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rdh5O55240 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
Rdh5O55240 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rdh5O55240 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rdh5O55240 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rdh5O55240 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rdh5O55240 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rdh5O55240 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rdh5O55240 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Rdh5O55240 Mir8098-201ENSMUST00000184011 137 ntBASIC14.7□□□□□ -0.06
Rdh5O55240 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.7□□□□□ -0.06
Rdh5O55240 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.7□□□□□ -0.06
Rdh5O55240 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.7□□□□□ -0.06
Rdh5O55240 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rdh5O55240 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rdh5O55240 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rdh5O55240 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Rdh5O55240 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rdh5O55240 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rdh5O55240 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.7□□□□□ -0.06
Rdh5O55240 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.7□□□□□ -0.06
Rdh5O55240 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rdh5O55240 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rdh5O55240 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rdh5O55240 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Rdh5O55240 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rdh5O55240 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Rdh5O55240 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rdh5O55240 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rdh5O55240 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.69□□□□□ -0.06
Rdh5O55240 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rdh5O55240 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rdh5O55240 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rdh5O55240 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Rdh5O55240 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rdh5O55240 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rdh5O55240 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rdh5O55240 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Rdh5O55240 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rdh5O55240 Gm44771-201ENSMUST00000206975 626 ntBASIC14.69□□□□□ -0.06
Rdh5O55240 Gm8655-201ENSMUST00000221159 852 ntBASIC14.69□□□□□ -0.06
Rdh5O55240 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rdh5O55240 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rdh5O55240 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.69□□□□□ -0.06
Rdh5O55240 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rdh5O55240 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rdh5O55240 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rdh5O55240 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rdh5O55240 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rdh5O55240 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rdh5O55240 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rdh5O55240 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rdh5O55240 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rdh5O55240 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rdh5O55240 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Rdh5O55240 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rdh5O55240 Asic1-205ENSMUST00000228185 1818 ntBASIC14.69□□□□□ -0.06
Rdh5O55240 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rdh5O55240 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rdh5O55240 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rdh5O55240 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.68□□□□□ -0.06
Rdh5O55240 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rdh5O55240 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rdh5O55240 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rdh5O55240 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Rdh5O55240 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rdh5O55240 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Rdh5O55240 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rdh5O55240 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rdh5O55240 Gm5864-201ENSMUST00000202263 970 ntBASIC14.68□□□□□ -0.06
Rdh5O55240 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.68□□□□□ -0.06
Rdh5O55240 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rdh5O55240 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rdh5O55240 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rdh5O55240 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Rdh5O55240 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Rdh5O55240 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rdh5O55240 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rdh5O55240 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.68□□□□□ -0.06
Rdh5O55240 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rdh5O55240 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rdh5O55240 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.68□□□□□ -0.06
Rdh5O55240 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rdh5O55240 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rdh5O55240 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rdh5O55240 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rdh5O55240 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rdh5O55240 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rdh5O55240 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rdh5O55240 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Rdh5O55240 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rdh5O55240 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Rdh5O55240 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Rdh5O55240 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rdh5O55240 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rdh5O55240 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.67□□□□□ -0.06
Rdh5O55240 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rdh5O55240 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms