Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Cacna1bO55017 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cacna1bO55017 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cacna1bO55017 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cacna1bO55017 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cacna1bO55017 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Cacna1bO55017 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cacna1bO55017 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cacna1bO55017 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cacna1bO55017 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cacna1bO55017 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cacna1bO55017 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cacna1bO55017 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cacna1bO55017 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cacna1bO55017 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cacna1bO55017 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cacna1bO55017 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cacna1bO55017 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cacna1bO55017 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Cacna1bO55017 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cacna1bO55017 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cacna1bO55017 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
Cacna1bO55017 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cacna1bO55017 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cacna1bO55017 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cacna1bO55017 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cacna1bO55017 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Cacna1bO55017 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.95□□□□□ -0.02
Cacna1bO55017 Gm7730-201ENSMUST00000212486 454 ntBASIC14.95□□□□□ -0.02
Cacna1bO55017 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cacna1bO55017 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cacna1bO55017 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cacna1bO55017 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cacna1bO55017 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC14.95□□□□□ -0.02
Cacna1bO55017 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cacna1bO55017 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
Cacna1bO55017 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.95□□□□□ -0.02
Cacna1bO55017 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Cacna1bO55017 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cacna1bO55017 Gm2810-201ENSMUST00000118681 990 ntBASIC14.95□□□□□ -0.02
Cacna1bO55017 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.95□□□□□ -0.02
Cacna1bO55017 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.95□□□□□ -0.02
Cacna1bO55017 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cacna1bO55017 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cacna1bO55017 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cacna1bO55017 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cacna1bO55017 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cacna1bO55017 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Cacna1bO55017 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cacna1bO55017 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cacna1bO55017 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Cacna1bO55017 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cacna1bO55017 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Cacna1bO55017 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cacna1bO55017 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.94□□□□□ -0.02
Cacna1bO55017 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cacna1bO55017 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cacna1bO55017 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cacna1bO55017 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.94□□□□□ -0.02
Cacna1bO55017 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cacna1bO55017 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.94□□□□□ -0.02
Cacna1bO55017 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.94□□□□□ -0.02
Cacna1bO55017 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cacna1bO55017 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cacna1bO55017 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cacna1bO55017 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Cacna1bO55017 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cacna1bO55017 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.94□□□□□ -0.02
Cacna1bO55017 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cacna1bO55017 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cacna1bO55017 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cacna1bO55017 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Cacna1bO55017 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cacna1bO55017 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cacna1bO55017 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Cacna1bO55017 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cacna1bO55017 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cacna1bO55017 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Cacna1bO55017 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cacna1bO55017 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cacna1bO55017 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cacna1bO55017 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.94□□□□□ -0.02
Cacna1bO55017 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.94□□□□□ -0.02
Cacna1bO55017 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Cacna1bO55017 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cacna1bO55017 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.94□□□□□ -0.02
Cacna1bO55017 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cacna1bO55017 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Cacna1bO55017 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cacna1bO55017 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Cacna1bO55017 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cacna1bO55017 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cacna1bO55017 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cacna1bO55017 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cacna1bO55017 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cacna1bO55017 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cacna1bO55017 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Cacna1bO55017 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.93□□□□□ -0.02
Cacna1bO55017 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cacna1bO55017 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms