Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.71■□□□□ 0.11
ChkaO54804 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.71■□□□□ 0.11
ChkaO54804 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.71■□□□□ 0.11
ChkaO54804 Gm8825-201ENSMUST00000182565 998 ntBASIC15.71■□□□□ 0.11
ChkaO54804 Gm4518-201ENSMUST00000182638 718 ntBASIC15.71■□□□□ 0.11
ChkaO54804 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.71■□□□□ 0.11
ChkaO54804 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.71■□□□□ 0.11
ChkaO54804 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.71■□□□□ 0.11
ChkaO54804 Gm44454-201ENSMUST00000198541 138 ntBASIC15.71■□□□□ 0.11
ChkaO54804 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
ChkaO54804 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.71■□□□□ 0.11
ChkaO54804 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.71■□□□□ 0.11
ChkaO54804 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ChkaO54804 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.71■□□□□ 0.11
ChkaO54804 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.71■□□□□ 0.11
ChkaO54804 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ChkaO54804 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ChkaO54804 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ChkaO54804 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.71■□□□□ 0.11
ChkaO54804 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ChkaO54804 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.71■□□□□ 0.1
ChkaO54804 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.7■□□□□ 0.1
ChkaO54804 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ChkaO54804 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ChkaO54804 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ChkaO54804 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
ChkaO54804 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ChkaO54804 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
ChkaO54804 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ChkaO54804 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ChkaO54804 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ChkaO54804 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ChkaO54804 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ChkaO54804 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
ChkaO54804 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.7■□□□□ 0.1
ChkaO54804 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ChkaO54804 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ChkaO54804 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ChkaO54804 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.7■□□□□ 0.1
ChkaO54804 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ChkaO54804 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ChkaO54804 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ChkaO54804 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
ChkaO54804 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
ChkaO54804 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
ChkaO54804 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ChkaO54804 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ChkaO54804 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ChkaO54804 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ChkaO54804 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ChkaO54804 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
ChkaO54804 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ChkaO54804 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ChkaO54804 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ChkaO54804 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ChkaO54804 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ChkaO54804 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ChkaO54804 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ChkaO54804 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ChkaO54804 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.69■□□□□ 0.1
ChkaO54804 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ChkaO54804 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.69■□□□□ 0.1
ChkaO54804 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.69■□□□□ 0.1
ChkaO54804 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ChkaO54804 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ChkaO54804 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
ChkaO54804 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
ChkaO54804 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ChkaO54804 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
ChkaO54804 Rprl3-201ENSMUST00000157400 290 ntBASIC15.69■□□□□ 0.1
ChkaO54804 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.69■□□□□ 0.1
ChkaO54804 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.69■□□□□ 0.1
ChkaO54804 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.69■□□□□ 0.1
ChkaO54804 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.69■□□□□ 0.1
ChkaO54804 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
ChkaO54804 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ChkaO54804 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
ChkaO54804 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ChkaO54804 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
ChkaO54804 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ChkaO54804 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ChkaO54804 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
ChkaO54804 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
ChkaO54804 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ChkaO54804 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
ChkaO54804 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ChkaO54804 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ChkaO54804 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ChkaO54804 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.68■□□□□ 0.1
ChkaO54804 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ChkaO54804 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ChkaO54804 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ChkaO54804 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ChkaO54804 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ChkaO54804 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ChkaO54804 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
ChkaO54804 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ChkaO54804 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ChkaO54804 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.68■□□□□ 0.1
ChkaO54804 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms