Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
Nr1i3O35627 Gm13836-201ENSMUST00000121159 501 ntBASIC16.69■□□□□ 0.26
Nr1i3O35627 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.69■□□□□ 0.26
Nr1i3O35627 Gm27704-201ENSMUST00000185094 107 ntBASIC16.69■□□□□ 0.26
Nr1i3O35627 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.69■□□□□ 0.26
Nr1i3O35627 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.69■□□□□ 0.26
Nr1i3O35627 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nr1i3O35627 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.69■□□□□ 0.26
Nr1i3O35627 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nr1i3O35627 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nr1i3O35627 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.69■□□□□ 0.26
Nr1i3O35627 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nr1i3O35627 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nr1i3O35627 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.69■□□□□ 0.26
Nr1i3O35627 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nr1i3O35627 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Nr1i3O35627 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nr1i3O35627 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nr1i3O35627 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nr1i3O35627 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Nr1i3O35627 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Nr1i3O35627 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nr1i3O35627 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nr1i3O35627 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nr1i3O35627 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nr1i3O35627 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nr1i3O35627 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nr1i3O35627 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Nr1i3O35627 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nr1i3O35627 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nr1i3O35627 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.68■□□□□ 0.26
Nr1i3O35627 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.68■□□□□ 0.26
Nr1i3O35627 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nr1i3O35627 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nr1i3O35627 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nr1i3O35627 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.68■□□□□ 0.26
Nr1i3O35627 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nr1i3O35627 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Nr1i3O35627 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nr1i3O35627 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Nr1i3O35627 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nr1i3O35627 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Nr1i3O35627 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nr1i3O35627 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nr1i3O35627 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nr1i3O35627 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nr1i3O35627 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nr1i3O35627 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nr1i3O35627 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nr1i3O35627 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nr1i3O35627 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nr1i3O35627 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nr1i3O35627 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nr1i3O35627 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.67■□□□□ 0.26
Nr1i3O35627 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nr1i3O35627 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.67■□□□□ 0.26
Nr1i3O35627 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.67■□□□□ 0.26
Nr1i3O35627 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.67■□□□□ 0.26
Nr1i3O35627 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.67■□□□□ 0.26
Nr1i3O35627 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nr1i3O35627 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.67■□□□□ 0.26
Nr1i3O35627 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nr1i3O35627 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Nr1i3O35627 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nr1i3O35627 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nr1i3O35627 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nr1i3O35627 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nr1i3O35627 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nr1i3O35627 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Nr1i3O35627 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nr1i3O35627 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nr1i3O35627 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nr1i3O35627 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nr1i3O35627 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nr1i3O35627 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nr1i3O35627 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nr1i3O35627 Gm4459-201ENSMUST00000118750 468 ntBASIC16.66■□□□□ 0.26
Nr1i3O35627 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Nr1i3O35627 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Nr1i3O35627 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Nr1i3O35627 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nr1i3O35627 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.66■□□□□ 0.26
Nr1i3O35627 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.66■□□□□ 0.26
Nr1i3O35627 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.66■□□□□ 0.26
Nr1i3O35627 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nr1i3O35627 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.66■□□□□ 0.26
Nr1i3O35627 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nr1i3O35627 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nr1i3O35627 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Nr1i3O35627 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nr1i3O35627 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nr1i3O35627 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Nr1i3O35627 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nr1i3O35627 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nr1i3O35627 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nr1i3O35627 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nr1i3O35627 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nr1i3O35627 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.66■□□□□ 0.26
Nr1i3O35627 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nr1i3O35627 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms