Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Slc1a6O35544 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.31■□□□□ 0.04
Slc1a6O35544 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc1a6O35544 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Slc1a6O35544 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc1a6O35544 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Slc1a6O35544 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc1a6O35544 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc1a6O35544 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc1a6O35544 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.31■□□□□ 0.04
Slc1a6O35544 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.31■□□□□ 0.04
Slc1a6O35544 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc1a6O35544 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc1a6O35544 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Slc1a6O35544 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc1a6O35544 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Slc1a6O35544 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Slc1a6O35544 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc1a6O35544 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc1a6O35544 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Slc1a6O35544 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.3■□□□□ 0.04
Slc1a6O35544 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Slc1a6O35544 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Slc1a6O35544 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc1a6O35544 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc1a6O35544 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Slc1a6O35544 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc1a6O35544 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Slc1a6O35544 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.3■□□□□ 0.04
Slc1a6O35544 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Slc1a6O35544 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC15.3■□□□□ 0.04
Slc1a6O35544 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc1a6O35544 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
Slc1a6O35544 AL672049.1-201ENSMUST00000197943 91 ntBASIC15.3■□□□□ 0.04
Slc1a6O35544 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Slc1a6O35544 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.3■□□□□ 0.04
Slc1a6O35544 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Slc1a6O35544 AC112142.1-201ENSMUST00000228796 918 ntBASIC15.3■□□□□ 0.04
Slc1a6O35544 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc1a6O35544 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc1a6O35544 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc1a6O35544 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc1a6O35544 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Slc1a6O35544 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc1a6O35544 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc1a6O35544 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc1a6O35544 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Slc1a6O35544 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.29■□□□□ 0.04
Slc1a6O35544 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc1a6O35544 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc1a6O35544 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc1a6O35544 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc1a6O35544 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc1a6O35544 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Slc1a6O35544 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc1a6O35544 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Slc1a6O35544 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Slc1a6O35544 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Slc1a6O35544 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.29■□□□□ 0.04
Slc1a6O35544 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc1a6O35544 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.29■□□□□ 0.04
Slc1a6O35544 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.29■□□□□ 0.04
Slc1a6O35544 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.29■□□□□ 0.04
Slc1a6O35544 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc1a6O35544 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc1a6O35544 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc1a6O35544 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc1a6O35544 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Slc1a6O35544 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc1a6O35544 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc1a6O35544 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc1a6O35544 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Slc1a6O35544 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc1a6O35544 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Slc1a6O35544 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc1a6O35544 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc1a6O35544 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.28■□□□□ 0.04
Slc1a6O35544 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.28■□□□□ 0.04
Slc1a6O35544 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc1a6O35544 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc1a6O35544 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc1a6O35544 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc1a6O35544 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc1a6O35544 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc1a6O35544 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Slc1a6O35544 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc1a6O35544 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc1a6O35544 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.28■□□□□ 0.04
Slc1a6O35544 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Slc1a6O35544 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc1a6O35544 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.28■□□□□ 0.04
Slc1a6O35544 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.28■□□□□ 0.04
Slc1a6O35544 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc1a6O35544 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc1a6O35544 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Slc1a6O35544 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc1a6O35544 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc1a6O35544 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc1a6O35544 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc1a6O35544 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms