Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn6O35454 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn6O35454 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn6O35454 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn6O35454 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn6O35454 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn6O35454 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn6O35454 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn6O35454 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.81■□□□□ 0.28
Clcn6O35454 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn6O35454 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn6O35454 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC16.81■□□□□ 0.28
Clcn6O35454 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC16.81■□□□□ 0.28
Clcn6O35454 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn6O35454 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC16.81■□□□□ 0.28
Clcn6O35454 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn6O35454 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn6O35454 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC16.81■□□□□ 0.28
Clcn6O35454 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn6O35454 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn6O35454 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn6O35454 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Clcn6O35454 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn6O35454 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn6O35454 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn6O35454 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn6O35454 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn6O35454 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn6O35454 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn6O35454 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn6O35454 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn6O35454 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn6O35454 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn6O35454 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn6O35454 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn6O35454 Asic1-205ENSMUST00000228185 1818 ntBASIC16.8■□□□□ 0.28
Clcn6O35454 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.8■□□□□ 0.28
Clcn6O35454 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn6O35454 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn6O35454 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn6O35454 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn6O35454 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC16.8■□□□□ 0.28
Clcn6O35454 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.8■□□□□ 0.28
Clcn6O35454 Gm44270-201ENSMUST00000203084 1234 ntBASIC16.8■□□□□ 0.28
Clcn6O35454 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.8■□□□□ 0.28
Clcn6O35454 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Clcn6O35454 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn6O35454 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn6O35454 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Clcn6O35454 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Clcn6O35454 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn6O35454 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn6O35454 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
Clcn6O35454 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Clcn6O35454 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Clcn6O35454 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn6O35454 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Clcn6O35454 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn6O35454 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn6O35454 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn6O35454 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn6O35454 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn6O35454 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn6O35454 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn6O35454 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn6O35454 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.8■□□□□ 0.28
Clcn6O35454 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.79■□□□□ 0.28
Clcn6O35454 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Clcn6O35454 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn6O35454 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn6O35454 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn6O35454 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn6O35454 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn6O35454 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn6O35454 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.79■□□□□ 0.28
Clcn6O35454 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn6O35454 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn6O35454 Gm11588-201ENSMUST00000141758 658 ntTSL 5 BASIC16.79■□□□□ 0.28
Clcn6O35454 Gm10231-201ENSMUST00000181584 441 ntBASIC16.79■□□□□ 0.28
Clcn6O35454 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn6O35454 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn6O35454 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC16.79■□□□□ 0.28
Clcn6O35454 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC16.79■□□□□ 0.28
Clcn6O35454 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn6O35454 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC16.79■□□□□ 0.28
Clcn6O35454 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC16.79■□□□□ 0.28
Clcn6O35454 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC16.79■□□□□ 0.28
Clcn6O35454 Gm10175-202ENSMUST00000208752 441 ntBASIC16.79■□□□□ 0.28
Clcn6O35454 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Clcn6O35454 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC16.79■□□□□ 0.28
Clcn6O35454 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn6O35454 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Clcn6O35454 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn6O35454 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Clcn6O35454 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.79■□□□□ 0.28
Clcn6O35454 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn6O35454 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn6O35454 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn6O35454 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn6O35454 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms