Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Efnb3O35393 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Efnb3O35393 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Efnb3O35393 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Efnb3O35393 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Efnb3O35393 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Efnb3O35393 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Efnb3O35393 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Efnb3O35393 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Efnb3O35393 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Efnb3O35393 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Efnb3O35393 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Efnb3O35393 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Efnb3O35393 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Efnb3O35393 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Efnb3O35393 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.3□□□□□ -0.44
Efnb3O35393 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Efnb3O35393 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Efnb3O35393 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Efnb3O35393 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Efnb3O35393 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Efnb3O35393 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Efnb3O35393 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Efnb3O35393 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Efnb3O35393 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Efnb3O35393 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Efnb3O35393 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Efnb3O35393 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Efnb3O35393 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Efnb3O35393 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Efnb3O35393 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Efnb3O35393 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Efnb3O35393 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.3□□□□□ -0.44
Efnb3O35393 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Efnb3O35393 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Efnb3O35393 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Efnb3O35393 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC12.3□□□□□ -0.44
Efnb3O35393 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Efnb3O35393 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Efnb3O35393 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Efnb3O35393 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Efnb3O35393 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Efnb3O35393 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Efnb3O35393 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.3□□□□□ -0.44
Efnb3O35393 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Efnb3O35393 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Efnb3O35393 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Efnb3O35393 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Efnb3O35393 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Efnb3O35393 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Efnb3O35393 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Efnb3O35393 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Efnb3O35393 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Efnb3O35393 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Efnb3O35393 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Efnb3O35393 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Efnb3O35393 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Efnb3O35393 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Efnb3O35393 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Efnb3O35393 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Efnb3O35393 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Efnb3O35393 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Efnb3O35393 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Efnb3O35393 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Efnb3O35393 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Efnb3O35393 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Efnb3O35393 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Efnb3O35393 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Efnb3O35393 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Efnb3O35393 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Efnb3O35393 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Efnb3O35393 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Efnb3O35393 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Efnb3O35393 Mir5130-201ENSMUST00000175160 84 ntBASIC12.29□□□□□ -0.44
Efnb3O35393 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Efnb3O35393 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Efnb3O35393 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Efnb3O35393 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Efnb3O35393 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Efnb3O35393 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Efnb3O35393 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Efnb3O35393 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Efnb3O35393 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Efnb3O35393 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Efnb3O35393 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Efnb3O35393 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Efnb3O35393 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Efnb3O35393 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Efnb3O35393 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Efnb3O35393 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Efnb3O35393 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Efnb3O35393 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Efnb3O35393 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Efnb3O35393 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Efnb3O35393 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Efnb3O35393 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Efnb3O35393 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Efnb3O35393 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Efnb3O35393 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Efnb3O35393 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms