Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnfrsf11aO35305 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.7■□□□□ 0.26
Tnfrsf11aO35305 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.7■□□□□ 0.26
Tnfrsf11aO35305 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnfrsf11aO35305 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnfrsf11aO35305 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnfrsf11aO35305 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnfrsf11aO35305 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tnfrsf11aO35305 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.69■□□□□ 0.26
Tnfrsf11aO35305 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Tnfrsf11aO35305 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Tnfrsf11aO35305 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tnfrsf11aO35305 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tnfrsf11aO35305 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tnfrsf11aO35305 Gm10060-201ENSMUST00000212002 111 ntBASIC16.69■□□□□ 0.26
Tnfrsf11aO35305 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tnfrsf11aO35305 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tnfrsf11aO35305 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tnfrsf11aO35305 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Tnfrsf11aO35305 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tnfrsf11aO35305 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tnfrsf11aO35305 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tnfrsf11aO35305 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Tnfrsf11aO35305 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnfrsf11aO35305 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnfrsf11aO35305 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnfrsf11aO35305 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnfrsf11aO35305 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnfrsf11aO35305 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnfrsf11aO35305 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.68■□□□□ 0.26
Tnfrsf11aO35305 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnfrsf11aO35305 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Tnfrsf11aO35305 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Tnfrsf11aO35305 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.68■□□□□ 0.26
Tnfrsf11aO35305 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnfrsf11aO35305 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.68■□□□□ 0.26
Tnfrsf11aO35305 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnfrsf11aO35305 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnfrsf11aO35305 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnfrsf11aO35305 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.68■□□□□ 0.26
Tnfrsf11aO35305 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnfrsf11aO35305 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.68■□□□□ 0.26
Tnfrsf11aO35305 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnfrsf11aO35305 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnfrsf11aO35305 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Tnfrsf11aO35305 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Tnfrsf11aO35305 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnfrsf11aO35305 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnfrsf11aO35305 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnfrsf11aO35305 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnfrsf11aO35305 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnfrsf11aO35305 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Tnfrsf11aO35305 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnfrsf11aO35305 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Tnfrsf11aO35305 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnfrsf11aO35305 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Tnfrsf11aO35305 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Tnfrsf11aO35305 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnfrsf11aO35305 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnfrsf11aO35305 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnfrsf11aO35305 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnfrsf11aO35305 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Tnfrsf11aO35305 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Tnfrsf11aO35305 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnfrsf11aO35305 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.67■□□□□ 0.26
Tnfrsf11aO35305 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Tnfrsf11aO35305 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Tnfrsf11aO35305 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
Tnfrsf11aO35305 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Tnfrsf11aO35305 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
Tnfrsf11aO35305 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.67■□□□□ 0.26
Tnfrsf11aO35305 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.67■□□□□ 0.26
Tnfrsf11aO35305 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnfrsf11aO35305 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Tnfrsf11aO35305 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnfrsf11aO35305 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnfrsf11aO35305 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnfrsf11aO35305 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Tnfrsf11aO35305 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnfrsf11aO35305 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnfrsf11aO35305 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.67■□□□□ 0.26
Tnfrsf11aO35305 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Tnfrsf11aO35305 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Tnfrsf11aO35305 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnfrsf11aO35305 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnfrsf11aO35305 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Tnfrsf11aO35305 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnfrsf11aO35305 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnfrsf11aO35305 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnfrsf11aO35305 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Tnfrsf11aO35305 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Tnfrsf11aO35305 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Tnfrsf11aO35305 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnfrsf11aO35305 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnfrsf11aO35305 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Tnfrsf11aO35305 Gm6550-201ENSMUST00000187574 993 ntBASIC16.66■□□□□ 0.26
Tnfrsf11aO35305 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.66■□□□□ 0.26
Tnfrsf11aO35305 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.66■□□□□ 0.26
Tnfrsf11aO35305 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnfrsf11aO35305 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms