Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col15a1O35206 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col15a1O35206 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Col15a1O35206 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Col15a1O35206 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Col15a1O35206 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col15a1O35206 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC19.76■□□□□ 0.75
Col15a1O35206 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col15a1O35206 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC19.76■□□□□ 0.75
Col15a1O35206 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC19.76■□□□□ 0.75
Col15a1O35206 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Col15a1O35206 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC19.76■□□□□ 0.75
Col15a1O35206 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Col15a1O35206 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Col15a1O35206 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col15a1O35206 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col15a1O35206 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Col15a1O35206 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC19.76■□□□□ 0.75
Col15a1O35206 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col15a1O35206 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col15a1O35206 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
Col15a1O35206 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col15a1O35206 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col15a1O35206 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col15a1O35206 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Col15a1O35206 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col15a1O35206 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col15a1O35206 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col15a1O35206 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col15a1O35206 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Col15a1O35206 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Col15a1O35206 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC19.75■□□□□ 0.75
Col15a1O35206 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Col15a1O35206 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col15a1O35206 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col15a1O35206 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col15a1O35206 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col15a1O35206 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col15a1O35206 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col15a1O35206 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.75■□□□□ 0.75
Col15a1O35206 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col15a1O35206 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col15a1O35206 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col15a1O35206 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col15a1O35206 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col15a1O35206 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col15a1O35206 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col15a1O35206 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col15a1O35206 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col15a1O35206 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC19.74■□□□□ 0.75
Col15a1O35206 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Col15a1O35206 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Col15a1O35206 Gm18737-201ENSMUST00000173594 937 ntBASIC19.74■□□□□ 0.75
Col15a1O35206 Gm5745-201ENSMUST00000183748 313 ntBASIC19.74■□□□□ 0.75
Col15a1O35206 CT009510.1-201ENSMUST00000227972 270 ntBASIC19.74■□□□□ 0.75
Col15a1O35206 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col15a1O35206 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
Col15a1O35206 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC19.74■□□□□ 0.75
Col15a1O35206 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col15a1O35206 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col15a1O35206 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col15a1O35206 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Col15a1O35206 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col15a1O35206 Gm43072-201ENSMUST00000200283 1671 ntBASIC19.74■□□□□ 0.75
Col15a1O35206 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col15a1O35206 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col15a1O35206 Gm11543-201ENSMUST00000120758 370 ntBASIC19.73■□□□□ 0.75
Col15a1O35206 Gm9824-201ENSMUST00000178707 561 ntBASIC19.73■□□□□ 0.75
Col15a1O35206 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Col15a1O35206 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col15a1O35206 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col15a1O35206 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Col15a1O35206 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col15a1O35206 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Col15a1O35206 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Col15a1O35206 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col15a1O35206 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col15a1O35206 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC19.73■□□□□ 0.75
Col15a1O35206 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col15a1O35206 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col15a1O35206 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Col15a1O35206 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col15a1O35206 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col15a1O35206 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col15a1O35206 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Col15a1O35206 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC19.72■□□□□ 0.75
Col15a1O35206 Gm38225-201ENSMUST00000194001 393 ntBASIC19.72■□□□□ 0.75
Col15a1O35206 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col15a1O35206 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col15a1O35206 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col15a1O35206 Gm42934-201ENSMUST00000196920 1345 ntBASIC19.72■□□□□ 0.75
Col15a1O35206 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.72■□□□□ 0.75
Col15a1O35206 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Col15a1O35206 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Col15a1O35206 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col15a1O35206 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col15a1O35206 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col15a1O35206 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col15a1O35206 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col15a1O35206 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms