Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Gm37722-201ENSMUST00000193757 208 ntBASIC16.82■□□□□ 0.28
Ube3aO08759 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ube3aO08759 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ube3aO08759 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Ube3aO08759 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Ube3aO08759 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ube3aO08759 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ube3aO08759 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC16.82■□□□□ 0.28
Ube3aO08759 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ube3aO08759 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ube3aO08759 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Ube3aO08759 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Ube3aO08759 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ube3aO08759 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ube3aO08759 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ube3aO08759 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.82■□□□□ 0.28
Ube3aO08759 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ube3aO08759 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ube3aO08759 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.82■□□□□ 0.28
Ube3aO08759 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ube3aO08759 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ube3aO08759 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ube3aO08759 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ube3aO08759 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ube3aO08759 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ube3aO08759 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Ube3aO08759 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ube3aO08759 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ube3aO08759 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ube3aO08759 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ube3aO08759 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ube3aO08759 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ube3aO08759 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.81■□□□□ 0.28
Ube3aO08759 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.81■□□□□ 0.28
Ube3aO08759 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.81■□□□□ 0.28
Ube3aO08759 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Ube3aO08759 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ube3aO08759 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ube3aO08759 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ube3aO08759 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Ube3aO08759 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Ube3aO08759 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Ube3aO08759 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ube3aO08759 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
Ube3aO08759 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ube3aO08759 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ube3aO08759 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ube3aO08759 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ube3aO08759 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ube3aO08759 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ube3aO08759 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ube3aO08759 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ube3aO08759 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ube3aO08759 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ube3aO08759 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ube3aO08759 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ube3aO08759 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ube3aO08759 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.8■□□□□ 0.28
Ube3aO08759 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ube3aO08759 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ube3aO08759 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ube3aO08759 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ube3aO08759 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ube3aO08759 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ube3aO08759 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ube3aO08759 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ube3aO08759 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ube3aO08759 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ube3aO08759 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.79■□□□□ 0.28
Ube3aO08759 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ube3aO08759 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ube3aO08759 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ube3aO08759 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ube3aO08759 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ube3aO08759 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ube3aO08759 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.79■□□□□ 0.28
Ube3aO08759 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ube3aO08759 Gm18032-201ENSMUST00000222541 538 ntBASIC16.79■□□□□ 0.28
Ube3aO08759 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ube3aO08759 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ube3aO08759 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ube3aO08759 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ube3aO08759 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ube3aO08759 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ube3aO08759 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ube3aO08759 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ube3aO08759 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ube3aO08759 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Ube3aO08759 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ube3aO08759 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ube3aO08759 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ube3aO08759 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.79■□□□□ 0.28
Ube3aO08759 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Ube3aO08759 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ube3aO08759 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ube3aO08759 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ube3aO08759 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ube3aO08759 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ube3aO08759 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ube3aO08759 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms