Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp35M0QWN7 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
Usp35M0QWN7 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp35M0QWN7 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Usp35M0QWN7 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp35M0QWN7 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp35M0QWN7 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp35M0QWN7 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp35M0QWN7 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Usp35M0QWN7 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Usp35M0QWN7 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Usp35M0QWN7 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp35M0QWN7 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.65■□□□□ 0.26
Usp35M0QWN7 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.65■□□□□ 0.26
Usp35M0QWN7 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Usp35M0QWN7 Gm6550-201ENSMUST00000187574 993 ntBASIC16.65■□□□□ 0.26
Usp35M0QWN7 Gm2213-201ENSMUST00000197485 688 ntBASIC16.65■□□□□ 0.26
Usp35M0QWN7 AV026068-213ENSMUST00000223675 1171 ntBASIC16.65■□□□□ 0.26
Usp35M0QWN7 Psmb5-202ENSMUST00000227257 622 ntBASIC16.65■□□□□ 0.26
Usp35M0QWN7 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp35M0QWN7 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Usp35M0QWN7 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp35M0QWN7 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp35M0QWN7 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp35M0QWN7 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp35M0QWN7 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp35M0QWN7 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp35M0QWN7 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Usp35M0QWN7 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Usp35M0QWN7 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp35M0QWN7 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Usp35M0QWN7 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp35M0QWN7 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp35M0QWN7 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp35M0QWN7 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.64■□□□□ 0.25
Usp35M0QWN7 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp35M0QWN7 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp35M0QWN7 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.64■□□□□ 0.25
Usp35M0QWN7 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Usp35M0QWN7 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Usp35M0QWN7 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp35M0QWN7 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.64■□□□□ 0.25
Usp35M0QWN7 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp35M0QWN7 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.64■□□□□ 0.25
Usp35M0QWN7 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.64■□□□□ 0.25
Usp35M0QWN7 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp35M0QWN7 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp35M0QWN7 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Usp35M0QWN7 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.64■□□□□ 0.25
Usp35M0QWN7 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp35M0QWN7 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Usp35M0QWN7 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp35M0QWN7 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Usp35M0QWN7 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Usp35M0QWN7 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp35M0QWN7 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Usp35M0QWN7 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp35M0QWN7 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp35M0QWN7 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp35M0QWN7 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Usp35M0QWN7 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Usp35M0QWN7 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.63■□□□□ 0.25
Usp35M0QWN7 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.63■□□□□ 0.25
Usp35M0QWN7 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp35M0QWN7 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp35M0QWN7 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Usp35M0QWN7 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp35M0QWN7 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp35M0QWN7 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.63■□□□□ 0.25
Usp35M0QWN7 Mir6404-201ENSMUST00000183699 94 ntBASIC16.63■□□□□ 0.25
Usp35M0QWN7 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp35M0QWN7 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.63■□□□□ 0.25
Usp35M0QWN7 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp35M0QWN7 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp35M0QWN7 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.63■□□□□ 0.25
Usp35M0QWN7 Gm15590-201ENSMUST00000078419 552 ntBASIC16.63■□□□□ 0.25
Usp35M0QWN7 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Usp35M0QWN7 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Usp35M0QWN7 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp35M0QWN7 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp35M0QWN7 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.62■□□□□ 0.25
Usp35M0QWN7 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp35M0QWN7 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.62■□□□□ 0.25
Usp35M0QWN7 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp35M0QWN7 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp35M0QWN7 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Usp35M0QWN7 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.62■□□□□ 0.25
Usp35M0QWN7 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp35M0QWN7 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp35M0QWN7 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp35M0QWN7 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp35M0QWN7 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Usp35M0QWN7 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp35M0QWN7 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp35M0QWN7 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Usp35M0QWN7 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp35M0QWN7 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp35M0QWN7 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp35M0QWN7 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp35M0QWN7 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms