Protein–RNA interactions for Protein: J3QM43

Gm6594, Predicted pseudogene 6594, mousemouse

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm6594J3QM43 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Gm6594J3QM43 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Gm6594J3QM43 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Gm6594J3QM43 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Gm6594J3QM43 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Gm6594J3QM43 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Gm6594J3QM43 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Gm6594J3QM43 Gm5421-201ENSMUST00000181698 2354 ntBASIC12.95□□□□□ -0.34
Gm6594J3QM43 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm6594J3QM43 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm6594J3QM43 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Gm6594J3QM43 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.95□□□□□ -0.34
Gm6594J3QM43 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Gm6594J3QM43 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.95□□□□□ -0.34
Gm6594J3QM43 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC12.95□□□□□ -0.34
Gm6594J3QM43 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Gm6594J3QM43 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.95□□□□□ -0.34
Gm6594J3QM43 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.95□□□□□ -0.34
Gm6594J3QM43 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Gm6594J3QM43 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Gm6594J3QM43 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Gm6594J3QM43 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm6594J3QM43 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm6594J3QM43 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Gm6594J3QM43 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm6594J3QM43 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Gm6594J3QM43 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm6594J3QM43 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm6594J3QM43 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm6594J3QM43 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm6594J3QM43 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.94□□□□□ -0.34
Gm6594J3QM43 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm6594J3QM43 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Gm6594J3QM43 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.94□□□□□ -0.34
Gm6594J3QM43 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm6594J3QM43 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC12.94□□□□□ -0.34
Gm6594J3QM43 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm6594J3QM43 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.94□□□□□ -0.34
Gm6594J3QM43 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Gm6594J3QM43 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Gm6594J3QM43 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Gm6594J3QM43 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Gm6594J3QM43 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm6594J3QM43 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gm6594J3QM43 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gm6594J3QM43 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gm6594J3QM43 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gm6594J3QM43 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm6594J3QM43 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Gm6594J3QM43 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm6594J3QM43 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm6594J3QM43 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gm6594J3QM43 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Gm6594J3QM43 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Gm6594J3QM43 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm6594J3QM43 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm6594J3QM43 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm6594J3QM43 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm6594J3QM43 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm6594J3QM43 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Gm6594J3QM43 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm6594J3QM43 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gm6594J3QM43 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm6594J3QM43 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gm6594J3QM43 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Gm6594J3QM43 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Gm6594J3QM43 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Gm6594J3QM43 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Gm6594J3QM43 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Gm6594J3QM43 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm6594J3QM43 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm6594J3QM43 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm6594J3QM43 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Gm6594J3QM43 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm6594J3QM43 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm6594J3QM43 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Gm6594J3QM43 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.93□□□□□ -0.34
Gm6594J3QM43 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm6594J3QM43 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Gm6594J3QM43 Mir7071-201ENSMUST00000184847 69 ntBASIC12.93□□□□□ -0.34
Gm6594J3QM43 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Gm6594J3QM43 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm6594J3QM43 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm6594J3QM43 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Gm6594J3QM43 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm6594J3QM43 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm6594J3QM43 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm6594J3QM43 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm6594J3QM43 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm6594J3QM43 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Gm6594J3QM43 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Gm6594J3QM43 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Gm6594J3QM43 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm6594J3QM43 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm6594J3QM43 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm6594J3QM43 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Gm6594J3QM43 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Gm6594J3QM43 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm6594J3QM43 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm6594J3QM43 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms